FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve918.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve918.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1034
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT15915.377176015473887No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT15815.28046421663443No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC878.413926499032883No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT807.7369439071566735No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT373.5783365570599615No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT312.998065764023211No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC292.804642166344294No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT272.611218568665377No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC201.9342359767891684No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT141.3539651837524178No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT131.2572533849129592No Hit
AGCCTAGACATCCACTGCTGTGGTCGGTGTGGTAATGATCCTTCCGCTGT121.160541586073501No Hit
AGCCTAGACATCCACTGCTGCTCGGAGATGTGGTAATGATCCTTCCGCTG90.8704061895551257No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGGCTCGGAGATGTGGTAATG80.7736943907156674No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT80.7736943907156674No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGATGTGGTAATGAT70.6769825918762089No Hit
AGCCTAGACATCCACTGCTGGAGATGTGGTAATGATCCTTCCGCTGTCTC50.4835589941972921No Hit
AGACTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT50.4835589941972921No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGTAATGATCCTTCCGCTGTC50.4835589941972921No Hit
AGCCTAGACATCCACTGCTGCGGTGGTAATGATCCTTCCGCTGTCTCTTA40.3868471953578337No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA40.3868471953578337No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC40.3868471953578337No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGCCTCTT30.2901353965183753No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT30.2901353965183753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGAATAAAAGCAGAGAC30.2901353965183753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAGAAGCAGAGAC30.2901353965183753No Hit
AGCCTAGACATCCACTGCTGATGTGTATAAGAGACAGTGGTAATGATCCT30.2901353965183753No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATTATCCTTCCGCTGTCTCT30.2901353965183753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGAATAAAAGCAGAGAC20.19342359767891684No Hit
AGCCTATACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT20.19342359767891684No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.19342359767891684No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGCGTGGTAATGATCCTTCCGCTGTCTCTTAT20.19342359767891684No Hit
AGCCTAGACATCTACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTATTAT20.19342359767891684No Hit
AGCCTAGACATTCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGTCGACGGTGGTAATGATCCTTCCGCTGTCT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATACTTCCGCTGTCTCTT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCCTGTCTCTTA20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGTATGTGGTAATGATCCTTCCGCTGTCTCTT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCGCT20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA20.19342359767891684No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT20.19342359767891684No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)