FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve902.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve902.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14
Sequences flagged as poor quality0
Sequence length301
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCATGAAAGCCTCCAGAGGCCTTGTAGCTGTTCTGGTTGAACTTGCC17.142857142857142No Hit
ACTCCGTGCAGGCCGCCGGAGGTCTCATAGACCTTGCTGTCGAACTTGCC17.142857142857142No Hit
ACGCCGTGCAGACCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC17.142857142857142No Hit
TCACTTGCGGTTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC17.142857142857142No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGT17.142857142857142No Hit
ACACCATGCAGGCCGCCTGATACTTTGTAGGAGCCCTTATCAAACTTGCC17.142857142857142No Hit
TCACTTGCGGCTCAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC17.142857142857142No Hit
TCACTTGCGGTTCGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC17.142857142857142No Hit
ACTCCATGGAGGCCGCCAGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC17.142857142857142No Hit
ACGCCATGGAATCCGCCCGAGACCTTGTAGGAGTTCTGGTCGAACTTACC17.142857142857142No Hit
TCTCCTTTTACTCCCTGTCCAACGCCTACGCCCTCGCTACCATACTCGTC17.142857142857142No Hit
CTCCTAGACATCCACTGCTTAACTTTTGTTTACGTGCACTCAAACACTTT17.142857142857142No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTTGTAAAGAAACACAAAAGCGTC17.142857142857142No Hit
TCACTTGCGGCTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC17.142857142857142No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)