FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve895.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve895.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences724
Sequences flagged as poor quality0
Sequence length301
%GC47

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT16322.513812154696133No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT14620.165745856353592No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT13919.19889502762431No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA598.149171270718233No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT435.939226519337017No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT30.4143646408839779No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAGAGCAAGGACTTT30.4143646408839779No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAGAGCAAGGACTT30.4143646408839779No Hit
AGCCTAGACATCCACTGCTGTGTCGTGGTAATGATCCTTCCGCTGTCTCT20.2762430939226519No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATAATCCTTCCGCTGTCTCT20.2762430939226519No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT20.2762430939226519No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.2762430939226519No Hit
CGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.2762430939226519No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGGCTTT20.2762430939226519No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA20.2762430939226519No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT20.2762430939226519No Hit
AGTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTCG20.2762430939226519No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT20.2762430939226519No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTGTAAATAAGAGCAAGGACTTT20.2762430939226519No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAAGCAAGGACTTT20.2762430939226519No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGGGACTTT20.2762430939226519No Hit
ACGCCGTGGAAGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.13812154696132595No Hit
ACTCCGTGGAGACCACCGGACACCTTGTAGGCGTTCGAATCATTGGTGTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGTAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGGCGGTAATGATCCTTCCGCTGTCTCTTATA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTAGTAATGATCCTTCCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCTACTGCTGAATGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAGGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACATCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGAATGATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCCTAGAAATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA10.13812154696132595No Hit
TCACTTGCGGCTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTAT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCATGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTTCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCGTGGTATGATCCTTCCGCTGTCTCTTAT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCC10.13812154696132595No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGAATT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCACTGTCTCT10.13812154696132595No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGTCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
CGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATACCAGCAAGGACTTT10.13812154696132595No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.13812154696132595No Hit
TCACTTGCGGTTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.13812154696132595No Hit
ACTCCGTGAAAGCCGCCTGACGTCTCATAGGCCTTGCCCGAGAATTTGCC10.13812154696132595No Hit
AGCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGATGTCTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAAGAGTC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTTGTGGTAATGATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
TCACTTGCGGTTGAACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTGTAAATAAAAGCAAGGACCTT10.13812154696132595No Hit
AGCCTAGACATACACTGCTGCTCGTGGTAATGATCCTTCCGCTGCCTCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAATAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCATGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAGATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACACCCACTGCTGTCTCGTGGTAATGATCTTTCCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGGTCGTCGGCAGCGTCAGAATGTGGTAATGA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTATCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTATATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCTGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAGAAGCAAGGACTTT10.13812154696132595No Hit
AAACTACATACACCCCTCCGGTTGGTGTTTTAAAAAAAAAAAATGATCTT10.13812154696132595No Hit
CCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTTC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
ACTCCATGTAGGCCGCCTGAGACCTTGTAGCTGTTCTGATTGAACTTGCC10.13812154696132595No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCGCGGTAAGGATCCTTCCGCGGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
ACTCCATGAAGACCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC10.13812154696132595No Hit
ACTCCGTGGAGCCCGCCTGACACCTTGTAGGCGTTCGAATCATTGGTGTT10.13812154696132595No Hit
AGCCTACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTCG10.13812154696132595No Hit
ACGACGTGGAGACCGCCTGAGACCTTCAAGGAGCTCTGGCCGAACTTACC10.13812154696132595No Hit
ACTCCATGTAAGCCGCCCGACACCTTGTAGCCGCCGCCGCCGAACTTGCC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTTGTAATGATCCTTCCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTTGGAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
ACCCCGTGAAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC10.13812154696132595No Hit
ACTCCGTGAAGACCTCCGGACACCTTGTAGCCGCCGCCGTCGCCGAACTT10.13812154696132595No Hit
TCACTTGCGGTTCGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.13812154696132595No Hit
AGCCTAGACATCCACCGCTGAAAGTTGTTGTAAACAAAAGCAAGGATTTC10.13812154696132595No Hit
AGTACATTGCAACCACCCGATTGCTAGTAACGATTCGGGTTTCGCTTACC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATACTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCCGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATTATCCTTCCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAATTTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACTTCCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCCTTAT10.13812154696132595No Hit
AGCCGAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCAACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTTTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGATATCCACTGCTGTCTCGTGGTAATGATTCTTCCGCTGTTTCT10.13812154696132595No Hit
AGCCTAGACATACACTGCTGTCGTGGTAATGATTCTTCCGCTGTCTCTTA10.13812154696132595No Hit
ACCCCTGATACTCCCCCCCTTCTCTGTGTAAATGTTCATTCCCTTTCTTT10.13812154696132595No Hit
GCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAACAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCAACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT10.13812154696132595No Hit
ACACCATGCAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC10.13812154696132595No Hit
CGCCTAAACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTCGGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCTTTCCGCTGTCTCGT10.13812154696132595No Hit
AGTCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCATTCCGCTGTCTCTT10.13812154696132595No Hit
TCACTTGCGGCTCAACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.13812154696132595No Hit
AGCCTAGAAATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTTTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTGTAAATAAAAGCAAGGACCTT10.13812154696132595No Hit
AGCCTAGACATACACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTATCTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTCTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGTCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTATACATTCACCGCTGAAAGTTGTTGTAAATAAAAGCAAGGATTTT10.13812154696132595No Hit
CGCCTAGACATCCACTGCTGAACGTTACTATCTGGTCAGAGCAAGGACTT10.13812154696132595No Hit
AAACTAGACAAACCCTGCTGTCTCGTGGTAATGATTCTTCCTCTGTTTCT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGTAATAATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTTGTAAATGAACGCAAAAACTTT10.13812154696132595No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
CGGCCTAGACATCCACTGCTGTCGTTGTAATGATCCTTCTGCTTTCTCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAGTGATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCAAGAGCAAGGACTT10.13812154696132595No Hit
ACTCCGTGCAGGCCACCTGAGACCTTGTATCCGCCGCCGTCGCCGAACTT10.13812154696132595No Hit
ATCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.13812154696132595No Hit
AAGTCTTTTAGCCTTGTATTTGGTTGTGTTTGTATCACTTGAAACTTAAT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTAGTGGTAATGATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCCTAGACATTCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCGCGTGGTAATGATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCGAGGACTTT10.13812154696132595No Hit
AGCCTAGCATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCATGGTAATGATCCTTCCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCACGGACTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTAGTGGTAATGATCCTTCCGCTGTCTCCTA10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATTATCCTTCCGCTGTCTCTT10.13812154696132595No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTCTC10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAATGTTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAGCAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACACCCACCGCTGCTCGTGGTAATGATCCTTCCGCTGTTTCTT10.13812154696132595No Hit
AGCCTAGACATCCATTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.13812154696132595No Hit
ACCCCATGGAAGCCTCCGGACACCTTGTAGGCATTGTCGTCGGACTTACT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGAATGATCCTTCCGCTGTCTCT10.13812154696132595No Hit
AGCCTAGACTCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT10.13812154696132595No Hit
AGCCCAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.13812154696132595No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)