FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve849.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve849.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences214
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT4320.093457943925234No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC2210.2803738317757No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT198.878504672897195No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGACGTGGTAATGATCCTTC167.476635514018691No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT115.14018691588785No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC52.336448598130841No Hit
AGCCTAGACATCCACTGCTGCAGTGGTAATGATCCTTCCGCTGTCTCTTA52.336448598130841No Hit
AGCCTAGACATCCACTGCTGCCAGTGGTAATGATCCTTCCGCTGTCTCTT52.336448598130841No Hit
AGCCTAGACATCCACTGCTGGGTGGTAATGATCCTTCCGCTGTCTCTTAT41.8691588785046727No Hit
AGCCTAGACATCCACTGCTGTCGCGGCCTCAGGTGGTAATGATCCTTCCG31.4018691588785046No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACCTT20.9345794392523363No Hit
AGCCTAGACATACACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.9345794392523363No Hit
AGCCTAGACATCCACTGCTGTCGTCGCAGCAGTGGTAATGATCCTTCCGC20.9345794392523363No Hit
AGCCTAGACATCCACTGCTGTGCACCAGTGTGGTAATGATCCTTCCGCTG20.9345794392523363No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGACGTGGTAATGATTCTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGACGTGGTAATGGTCCTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAATTTGTTATCTAGTTAAAAGCAAGGACT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGGGCTCGGAGCGTGGTAATGATCCTTCCGCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTTGTCGGAGCGTCAGATGTGGTAATGATCC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCGTCGGCAGCATCAGATGTGGTAATGATC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT10.46728971962616817No Hit
AGCCCAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGACGACGACGTGGTAATGATCCTTCCGCTGT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTTCGTGGGCCGGAGACGTGGTAATGATCCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA10.46728971962616817No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.46728971962616817No Hit
AGCCTAGACATCAACTGCTGTCTCTTATACACAGTGGTAATGATCCTTCC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCGGGGCCTCAGGTGGTAATGATCCTTCCG10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGTCTCT10.46728971962616817No Hit
AGCCTAGACATCCACTCCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTAT10.46728971962616817No Hit
AGCCTAGACGTCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT10.46728971962616817No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT10.46728971962616817No Hit
AGCCCAGACATCCACTGCTGACGCTGCAGACGACGCGGTAATGATCTTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCGTCGGCACGTCAGATGTGGTAATGATCC10.46728971962616817No Hit
CCCCTAGATATCCCCTGCTTCCAGTTTTTTGTACTGAACGCAACCACTTT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCGCGGAGCGTCAGTGGTAATGATCCTTCCG10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCCGTCGGCAGCGTCAGACGTGGTAATTATC10.46728971962616817No Hit
AGCCTAGAATCCACTTCTGAAAGTTGTTATCTAGTTAAAATCAAGGACTT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGAATAAAAGCAGAGAC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTATCTAGAATAAAAGTAGAGACT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATTATCCTTCCGCTGTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCC10.46728971962616817No Hit
AGCCTAGACATACACTGCTGACGCTGCAGACGACGTGGTAATGATCCTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGATCGGAGTGGTAATGATCCTTCCGCTGTCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCGCCGCAGCGTCAGATGTGGTAATGATCCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCGCAGATGTGGTAATGATCCTTCCGCTGTC10.46728971962616817No Hit
AGACTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATTATCCTTCCGCTGT10.46728971962616817No Hit
CTCCACTTACCTATTCGTCAGTTTTCATCTCTTCTTCCTCTCCCCTCTCC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGGCAGCGCAGATGTGGTAATGATCCTTCCGC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCGCGCACGTCAGATGTGGTAATGATCCTT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAATATAAACAAAGAGATT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCGTGGCAGCTCAGATGTGGTAATGATCCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCGTCAGATGTGGTAATGATCCTTCCGCTGT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGGTCGCAGCGTCAGATGTGGTAATGATCCTT10.46728971962616817No Hit
GCCTAGGCATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCCGATCTGTGGTAATGATCCTTCCGCTGT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAACAAGGACTTT10.46728971962616817No Hit
AGACTAGACATCCACTGCTGACGCTGCCGACGACGTGGTAATGATTCTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTTGCTCAGAGTGGTAATGATCCTTCCGCTG10.46728971962616817No Hit
AGACTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT10.46728971962616817No Hit
AGCCTAGACATCCAATGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTGTAAATAAAAGCAAGGACTTT10.46728971962616817No Hit
AGCCTAGACATCCATTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCGAGGACTTT10.46728971962616817No Hit
AGCCTAGACATCAACTGCTGGGCTCGGAGTGTGGTAATGATCCTTCCGCT10.46728971962616817No Hit
CCCTTCGCTTCTTCCTTTCTTGGTTTCTACTTTTTCTCCATTCTGCCTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGACGCTGACGACGACGTGGTAATGATCCTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCGTGGCAGCGCAGATGTGGTAATGATCCT10.46728971962616817No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCAGCTAGTGGTAATGATCCTTCCGCTGTCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGACGTGGTAATGATACTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGGGCCGGAGATGTGGTAATGATCCTTCCGCT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAATGACTTT10.46728971962616817No Hit
AGACTAGACATCCACTGCTGCAGTGGTAATGATCCTTCCGCTGTCTCTTA10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTTATCTATGATCGCAGCAGAGTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAGCTGCCGACGACGTGGTAATGATCCTTC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACAGTGGTAATGATCCTTCC10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGCGCGGCAGCGTCTGTGGTAATGATCCTTCC10.46728971962616817No Hit
AGCCTAGACCTCCACTGCTGCCAGTGGTAATGATCCTTCCGCTGTCTCTT10.46728971962616817No Hit
TACTATATAGTAAATGGGGTCTGAAGTATTGTAACTAGATATCTTACGTT10.46728971962616817No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.46728971962616817No Hit
AGCCTAGACATACACTGCTGCTGGCAGGTCGATGTGGTAATGATCCTTCC10.46728971962616817No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)