FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve846.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve846.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1719
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT32118.673647469458988No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC22813.263525305410123No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA1086.282722513089005No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT915.293775450843514No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC915.293775450843514No Hit
AGCCTAGACATCCACTGCTGGTCCGTGGGCTGGAGATGTGGTAATGATCC875.06108202443281No Hit
AGCCTAGACATCCACTGCTGTTGTGGTAATGATCCTTCCGCTGTCTCTTA844.886561954624781No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC744.304828388598022No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT583.3740546829552063No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT311.8033740546829553No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT251.4543339150668992No Hit
AGCCTAGACATCCACTGCTGCAGCGTCAGATGTGGTAATGATCCTTCCGC191.1052937754508436No Hit
AGCCTAGACATCCACTGCTGGTAATGATCCTTCCGCTGTCTCTTATACAC181.0471204188481675No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC130.7562536358347877No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT110.6399069226294357No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA90.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC70.4072134962187318No Hit
AGCCTAGACATCCACTGCTGGTCCGCGGGCTGGAGATGTGGTAATGATCC70.4072134962187318No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGTCTCT50.29086678301337987No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT50.29086678301337987No Hit
AGCCTAGACATCCACTGCTGCGTGCGCAGTGGTAATGATCCTTCCGCTGT50.29086678301337987No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT50.29086678301337987No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCTAAAACTTT50.29086678301337987No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCATTCCGCTGTCTCT50.29086678301337987No Hit
AGCCTAGACATACACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC40.2326934264107039No Hit
AGCCTAGACATCCACTGCTGTCGACGAGTGGTAATGATCCTTCCGCTGTC30.17452006980802792No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTAT30.17452006980802792No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.17452006980802792No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGCGCTAGATGTGTATAAGAGACA30.17452006980802792No Hit
AGCCTAGACATCCACTGCTGGTGTCGTGGTAATGATCCTTCCGCTGTCTC30.17452006980802792No Hit
AGCCTAGACATCCACTGCTGGTGTCGTGTCTTGACTATCAAGCTAGTCTC30.17452006980802792No Hit
AGCCTAGACATCCACTGCTGCCGAAGAGTGGTAATGATCCTTCCGCTGTC30.17452006980802792No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT30.17452006980802792No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTA20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGTCTCGTGATAATGATCCTTCCGCTGTCTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCACTGTCTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGACGACGAGTGGTAATGATCCTTCCGCTGTC20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTGTCT20.11634671320535195No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTAGTCTCGTGGTAATGATCCTTCCGCTGTCTC20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCGCTGTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCAGCTGTC20.11634671320535195No Hit
AGCCTAGAAATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC20.11634671320535195No Hit
AGACTAGACATCCACTGCTGGTCCGTGGGCTGGAGATGTGGTAATGATCC20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGATGTC20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCCTACGAGTGGTAATGATCCTTCCGCTGTC20.11634671320535195No Hit
AGCCTAGACATACACTGCTGGTCCGTGGGCTGGAGATGTGGTAATGATCC20.11634671320535195No Hit
AGCCTAGACATCCACTGGTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTCCGCTGTCTCT20.11634671320535195No Hit
AGCCTAGACATCAACTGCTGGTCCGTGGGCTGGAGATGTGGTAATGATCC20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCAGCGTCATATGTGGTAATGATCCTTCCGC20.11634671320535195No Hit
AGCCTAGACATCCACTGCTTCCGACGAGTGGTAATGATCCTTCCGCTGTC20.11634671320535195No Hit
AGCCTAGACATCAACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGATGTGGTAATGAT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCCGATGAGTGGTAATGATCCTTCCGCTGTC20.11634671320535195No Hit
AGCCTAGAAATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.11634671320535195No Hit
TGGTAATGATCCTTCCGCTGTCTCTTATACACATCTGACGCTGCCGACGA20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTC20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTCTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCCGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTAAACGCAAAAACTTT20.11634671320535195No Hit
AGCCTAGACATCCACTGCTGGTCCGTGGGTTGGAGATGTGGTAATGATCC20.11634671320535195No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)