FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve841.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve841.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences518
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT16131.08108108108108No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC14728.37837837837838No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT336.370656370656371No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT254.826254826254826No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCCGCTGTCTCTT214.054054054054054No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA173.2818532818532815No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC91.7374517374517375No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC50.9652509652509652No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATGATCCTTCCGCTGTCTC40.7722007722007722No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTGAACGCAAAAACTTT30.5791505791505791No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC30.5791505791505791No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAGAACTTT20.3861003861003861No Hit
AGCCTCGACATCCACTGCTGGAAGTTTGTGGAAGTGAACGCCAAAACTTT20.3861003861003861No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAACTTT20.3861003861003861No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.3861003861003861No Hit
AGCCTAGACATCCACTGCTGGTGGGCTCGGAGATGTGGTAATGATCCTTC20.3861003861003861No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.3861003861003861No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGAC20.3861003861003861No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAGAGCAGAGAC10.19305019305019305No Hit
AGCCTAGATATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTACGCTGTCTCT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGCTGTGAACGCAAAAACTTT10.19305019305019305No Hit
AGGCTAGACATACACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTAGAAGTGAACGCAAAAACTTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATTCCGCTGTCTCTTATAC10.19305019305019305No Hit
ACCCCTTGTAAACCGCCTGACACCTTGTAGGCCTTCTCCTCCGATGTGTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGTAAAAACTTT10.19305019305019305No Hit
ACGCCGTGTAAACCTCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTGCC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTATCT10.19305019305019305No Hit
AGCCTAGAAATCCACTGCTGGATGTGGTAATGATCCTTCCGCTTCTCTTA10.19305019305019305No Hit
GAGCCTAGACATCCACTACTGTCGTGGTAATGATCCTTCCGCTGTCTCTT10.19305019305019305No Hit
AGCCTAGACATCTACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.19305019305019305No Hit
ACTCCGTGCAGGCCACCTAAGACCTATTAACCCCCGCCGTCTCCGAAATT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAACGTTTGTGTAAGTTAACGCAACAACTTT10.19305019305019305No Hit
CATCTTCTTTCTTCCTCTCTTCTGTCTCCTCTCTCTCCTTTTTTTCCCTT10.19305019305019305No Hit
ACACCATGGAGTCCACCCGACACCTTGTAGCCGCCGCCGTCGCCGAACTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGTATCGTGGTAATGATCCTTCCGCTGTCTCT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAACTTTGTGGAAGTGAACGCAAAAACTTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTTAACGCAAAACTTTC10.19305019305019305No Hit
AGCCTAGACACCCACTGCTGGAAGTTGTTATTTAGAATAAAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACTCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGAATAAAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGATGTCTCTTA10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGAATAAAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACATCCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGATA10.19305019305019305No Hit
ATCCTAGACATCCACTGCTTAAAGTTGTTATCTAGACTAAAAGCAGAGAC10.19305019305019305No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.19305019305019305No Hit
AGCCTAGATATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGGCTCGGAGATGTGGTAATGATC10.19305019305019305No Hit
AGCCTGGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGAAAACAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGGATAAAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTGAACGCAAAAACTTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCGAACGCAAAAACTTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTTGAAGTGAACGCAAAACTTTC10.19305019305019305No Hit
AGCCTAGACATCAACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.19305019305019305No Hit
TATATTCAGTAGTCCTGTCTCGAGGCTGTACTATTGTGATGTTTACTGTC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGGAAAAACTTT10.19305019305019305No Hit
AGCCTAGACAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGA10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGGC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTCT10.19305019305019305No Hit
AGCCTATACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAACTTTC10.19305019305019305No Hit
ATCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.19305019305019305No Hit
AGCCTAGACATCGACTGCTGAAAGTTGTTAGCTAGAATAAAAGCAGAGAT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCATAGAC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT10.19305019305019305No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGATAC10.19305019305019305No Hit
AGCCTAGACATACACTGCTGACGAGTGGTAATTATCCTTCCGCTGTCTCT10.19305019305019305No Hit
AGCCTAGAAATACACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGTAGTGGTAATGATCCTTCCGCTGTCTCTTA10.19305019305019305No Hit
AGCCTAGCATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGACT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATAATCCTTCCGCTGTCTCT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGCTCTT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGGATGTGGTAATGATCCTTCAGCTGTCTCTT10.19305019305019305No Hit
ACTCCTGTAAGCCGCCGGAGACCTTGTAGGAATTCTGTTCGAACTTGCCG10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTATAATAAAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGGTCTTGTGGTAATGATCCTTCCGCTGTCTC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCAGCTGTCTC10.19305019305019305No Hit
AGCGTAGACCTCTACTGCACAAAGTTGGTAGTTAGGACAACTCGGAGCTT10.19305019305019305No Hit
TACCATCCTTCTTCTCCTCTTCTCTCTCCCCTCTCTCCTTTTTTTCCCCC10.19305019305019305No Hit
AGCCTAGAAATACACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGCAGAGACT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAGAAACTTT10.19305019305019305No Hit
ACTCCATGGAGGCCACCCGGATGCCGCGTACGAACCGCCGCCGAACTTGC10.19305019305019305No Hit
AGACTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.19305019305019305No Hit
GCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTC10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAGTAAAAGCAGAGAC10.19305019305019305No Hit
AGCCTAGACGTCCACTGCTGTCTCGTGGTAATGACCTTCCGCTGTCTCTT10.19305019305019305No Hit
CGGCTGAGTTCTTCATCGATCATCTATCCAAGAGATCCGTTTTTGCAATT10.19305019305019305No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCGGCTGTCTCT10.19305019305019305No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)