FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve839.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve839.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1848
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT42422.943722943722943No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC25813.96103896103896No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT23912.932900432900432No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC18710.119047619047619No Hit
AGCCTAGACATCCACTGCTGGGTGGTAATGATCCTTCCGCTGTCTCTTAT1437.738095238095238No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC1307.034632034632035No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT864.653679653679654No Hit
AGCCTAGACATCCACTGCTGTTCGTGGTAATGATCCTTCCGCTGTCTCTT281.5151515151515151No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAGAACTTT80.4329004329004329No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT70.3787878787878788No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA60.3246753246753247No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGTTAAAAGCAAGGACT50.27056277056277056No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAAGGACT50.27056277056277056No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT40.21645021645021645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGTACT40.21645021645021645No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAGGACT40.21645021645021645No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT40.21645021645021645No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGACGACGAGTGGTAATGATCCTTCCGCTGTC30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCGGAGAC30.16233766233766234No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC30.16233766233766234No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAGAAGCAAGGACT30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGGCT30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGCCGACAAGTGGTAATGATCCTTCCGCTGTC30.16233766233766234No Hit
AGCTTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCGAAAACTTT30.16233766233766234No Hit
AGCCTAGACATCCACTGCTTCCGACGAGTGGTAATGATCCTTCCGCTGTC30.16233766233766234No Hit
AGCCTAGACATCCACTGCTGCCGAAGAGTGGTAATGATCCTTCCGCTGTC30.16233766233766234No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT30.16233766233766234No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACTT20.10822510822510822No Hit
AGCCTAGACATACACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGTGAACGCAAAAACTTTC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAAGACT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTTAACGCAAAAACTTT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAATAGCAAGGACT20.10822510822510822No Hit
CCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTCG20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAACAAAAGCAGAGAC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGTTCGTGGTAATGATACTTCCGCTGTCTCTT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT20.10822510822510822No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10822510822510822No Hit
AGCCTAGACATACACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGGCTGGTAATGATCCTTCCGCTGTCTCTTAT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAACTTT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTTAAAAGCAAGGACT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAACAAGGACT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTT20.10822510822510822No Hit
AGACTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTTAAAAGCAAGGACT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGTTCGTTGTAATGATCCTTCCGCTGTCTCTT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATACTTCCGCTGTCTCTTAT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATTATCCTTCCGCTGTC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTACGCTGTCTC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTGAACGCAAAAACTTT20.10822510822510822No Hit
AGCCTAGACATCCACTTCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT20.10822510822510822No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGGTATCGTGGTAATGATCCTTCCGCTGTCTC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAA20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGGC20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGGTTGGTAATGATCCTTCCGCTGTCTCTTAT20.10822510822510822No Hit
AGCCTAGACATCCGCTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.10822510822510822No Hit
AGCCTAGACATACACTGCTGGGTGGTAATGATCCTTCCGCTGTCTCTTAT20.10822510822510822No Hit
AGCCTAGACATCCACTGCTGCCGACGTGTGGTAATGATCCTTCCGCTGTC20.10822510822510822No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)