FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve836.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve836.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1536
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20513.346354166666666No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1409.114583333333332No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT1308.463541666666668No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT1197.747395833333333No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT1167.552083333333333No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT1076.966145833333333No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA724.6875No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT483.125No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGATGTGGTAATGAT483.125No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT191.2369791666666665No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC110.7161458333333333No Hit
AGCCTAGACATCCACTGCTGCCGACAAGTGGTAATGATCCTTCCGCTGTC90.5859375No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGGTGTGGTAATGAT80.5208333333333333No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA60.390625No Hit
AGCCTAGACATCCACTGCTGACTGTGGTAATGATCCTTCCGCTGTCTCTT50.32552083333333337No Hit
AGCCTAGACATCCACTGCTGGCGACGAGTGGTAATGATCCTTCCGCTGTC40.26041666666666663No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT40.26041666666666663No Hit
AGCCTAGACATACACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC30.1953125No Hit
AGCCTAGACATCCACTGCTGTATGTGGTAATGATCCTTCCGCTGTCTCTT30.1953125No Hit
AGCCTAGACATCCACTGCTTGTGGTAATGATCCTTCCGCTGTCTCTTATA30.1953125No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTACGCTGTC30.1953125No Hit
AGACTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA30.1953125No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGGGATGTGGTAATGAT30.1953125No Hit
AGCCTAGACATCCACTGCTGCAGACGAGTGGTAATGATCCTTCCGCTGTC30.1953125No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGGTCGGAGATGTGGTAATGAT30.1953125No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTTGTAATGATCCTTCCGCTGTC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGAATAAAAGCAGAGAC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCGGAGAC20.13020833333333331No Hit
AGCCTAGACATCCACTCCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTCTCGGAGATGTGGTAATGAT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCAGCTGTC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAGAGCAGAGAC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCCCTTAT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGGCGACAAGTGGTAATGATCCTTCCGCTGTC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGCCGAAGAGTGGTAATGATCCTTCCGCTGTC20.13020833333333331No Hit
AGCCTAGACATCCACCGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA20.13020833333333331No Hit
AGCCTAGACATTCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGCCAACGAGTGGTAATGATCCTTCCGCTGTC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAGTAAAAGCAGAGAC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGATGTGGTAATAAT20.13020833333333331No Hit
AGCCTAGACATCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTTA20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGACGACGAGTGGTAATGATCCTTCCGCTGTC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATACTTCCGCTGTCTCTT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCATTCCGCTGTCTCTTAT20.13020833333333331No Hit
AGCCTAGACATCAACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCCCTT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATATCCTTCCGCTGTCT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGCCGGCGAGTGGTAATGATCCTTCCGCTGTC20.13020833333333331No Hit
AGCCTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.13020833333333331No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATACTTCCGCTGTCTCTTATA20.13020833333333331No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)