FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve828.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve828.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2576
Sequences flagged as poor quality0
Sequence length301
%GC48

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT67726.28105590062112No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT66625.85403726708074No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT1636.327639751552796No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC1054.076086956521739No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT813.1444099378881987No Hit
AGCCTAGACATCCACTGCTGACGACGACGTGGTAATGATCCTTCCGCTGT532.0574534161490683No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC451.746894409937888No Hit
AGCCTAGACATCCACTGCTGGCGTGGTAATGATCCTTCCGCTGTCTCTTA351.358695652173913No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC240.9316770186335404No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC190.7375776397515528No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT160.6211180124223602No Hit
AGCCTAGACATCCACTGCTGCCGAGGTGGTAATGATCCTTCCGCTGTCTC100.38819875776397517No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA80.3105590062111801No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT80.3105590062111801No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT70.2717391304347826No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT70.2717391304347826No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT70.2717391304347826No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT70.2717391304347826No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAGTAAAAGCAAGGACTTT60.2329192546583851No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT60.2329192546583851No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGGGACTTT50.19409937888198758No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT50.19409937888198758No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT50.19409937888198758No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTAAATAAAAGCAAGGACTTT50.19409937888198758No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.15527950310559005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGCAAATAAAAGCAAGGACTTT40.15527950310559005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT40.15527950310559005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTC40.15527950310559005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT40.15527950310559005No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT40.15527950310559005No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT40.15527950310559005No Hit
AGCCTAGACATCCACTGCTGCTCGGAGATGTGGTAATGATCCTTCCGCTG40.15527950310559005No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAACTAAAAGCAAGGACTTT40.15527950310559005No Hit
AGCTTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.11645962732919254No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT30.11645962732919254No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGTTGTGGTAATGATC30.11645962732919254No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAGAGCAAGGACTT30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACTTCCGCTGTCTCT30.11645962732919254No Hit
AGACTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAGGCAAGGACTTT30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAATAAAAGCAAGGACTTTC30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAGAAGCAAGGACTTT30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTGTAAATAAAAGCAAGGACTTT30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAAGCAAGGACTTT30.11645962732919254No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATT30.11645962732919254No Hit
AGGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACT30.11645962732919254No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)