FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve808.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve808.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3934
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT297675.64819522114897No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT1654.194204372140315No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT531.3472292831723438No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTAAGGTTAAAACCAAAGACTTT280.7117437722419928No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT220.5592272496187087No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT170.4321301474326385No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAAAGCAAGGACTT140.3558718861209964No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC130.33045246568378245No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAAAGCAAGGACTT130.33045246568378245No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT130.33045246568378245No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT130.33045246568378245No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAAAGCAAGGACTT120.3050330452465684No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT120.3050330452465684No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT110.27961362480935437No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAAAGCAAGGACTT110.27961362480935437No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAATAAAAGCAAGGACTTT110.27961362480935437No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAAAGCAAGGACTT100.2541942043721403No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACCT100.2541942043721403No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT100.2541942043721403No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCGAGGACTT100.2541942043721403No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGATTT90.22877478393492628No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT90.22877478393492628No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAAAGCAAGGACTT90.22877478393492628No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT80.20335536349771224No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT80.20335536349771224No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAATGACTT80.20335536349771224No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCAAAAGCAAGGACTT80.20335536349771224No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAACAAGGACTT80.20335536349771224No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGATGTGGTAATGAT80.20335536349771224No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTAAAAGCAAGGACTT70.1779359430604982No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGTAAAAGCAAGGACTT70.1779359430604982No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT70.1779359430604982No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT60.1525165226232842No Hit
AGCCTAGACATCCACTGCCGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.12709710218607015No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.12709710218607015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGAAGCAAGGACTT50.12709710218607015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAATAAAAGCAAGGACTT50.12709710218607015No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.12709710218607015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAAAGCAAGGACTT50.12709710218607015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAAAGCAAGGACTT50.12709710218607015No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC40.10167768174885612No Hit
AGCCTAGACATCCACTGATGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.10167768174885612No Hit
GCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTT40.10167768174885612No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT40.10167768174885612No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGTAAGGACTT40.10167768174885612No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.10167768174885612No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAATCAAGGACTT40.10167768174885612No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGTACTT40.10167768174885612No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAAGACTT40.10167768174885612No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.10167768174885612No Hit
AGCCTAGACATCCACTGCTGAAAGTTATTATCTAGTAAAAGCAAGGACTT40.10167768174885612No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)