FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve787.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve787.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1389
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC31722.822174226061914No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA19914.326853851691865No Hit
AGCCTAGACATCCACTGCTGGTGTGGTAATGATCCTTCCGCTGTCTCTTA1148.207343412526997No Hit
AGCCTAGACATCCACTGCTGTCGGCCGTATGTGGTAATGATCCTTCCGCT1067.631389488840893No Hit
AGCCTAGACATCCACTGCTGTAAAGAAGTGGTAATGATCCTTCCGCTGTC1007.199424046076314No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT765.471562275017998No Hit
AGCCTAGACATCCACTGCTGGCTCGGAGATGTGGTAATGATCCTTCCGCT674.82361411087113No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA372.663786897048236No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC70.5039596832253419No Hit
AGCCTAGACATCCACTGCTGGTAATGATCCTTCCGCTGTCTCTTATACAC70.5039596832253419No Hit
AGCCTAGACATCCACTGCTGTCTCTCATACACATCTGACGCTGCCGACGA70.5039596832253419No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT60.4319654427645789No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA50.3599712023038157No Hit
AGCCTAGACATACACTGCTGGTGTGGTAATGATCCTTCCGCTGTCTCTTA40.28797696184305255No Hit
AGCCTAGACATCCACTGCTGTCTCCTATACACATCTGACGCTGCCGACGA40.28797696184305255No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATGATCCTTCCGCTGTCTC40.28797696184305255No Hit
AGCCTAGACATACACTGCTGTCGGCCGTATGTGGTAATGATCCTTCCGCT40.28797696184305255No Hit
AGCCTAGACATCCACTGCTGTCGACGAGTGGTAATGATCCTTCCGCTGTC30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGAGGTGGTAATGATCCTTCCGCTGTCTCTTA30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGGCGACGAGTGGTAATGATCCTTCCGCTGTC30.21598272138228944No Hit
AGCCTAGACATCCACTGCTTATGTGGTAATGATCCTTCCGCTGTCTCTTA30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGGCTAGGAGATGTGGTAATGATCCTTCCGCT30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGCGGACGAGTGGTAATGATCCTTCCGCTGTC30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGCCGAAGAGTGGTAATGATCCTTCCGCTGTC30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGCCGGCGAGTGGTAATGATCCTTCCGCTGTC30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGCCGACGTGTGGTAATGATCCTTCCGCTGTC30.21598272138228944No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTT20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGCTGACGAGTGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGACGACGAGTGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTTGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTATGTGGTAATGATCCTTCCGCTGTCTCTTAT20.14398848092152627No Hit
AGCCTAGACATACACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATACTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGTCGGACGTATGTGGTAATGATCCTTCCGCT20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGCAGAGAC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGATCTGGTAATGATCCTTCCGCTGTCTCTTA20.14398848092152627No Hit
AGACTAGACATCCACTGCTGTAAAGAAGTGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGCCGAGGAGTGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGTAAAGAAGTGGTAATGATACTTCCGCTGTC20.14398848092152627No Hit
AGACTAGACATCCACTGCTGTCGGCCGTATGTGGTAATGATCCTTCCGCT20.14398848092152627No Hit
AGCCTAGACATACACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGTTGTGGTAATGATCCTTCCGCTGTCTCTTA20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGCCGACGAGGGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATAATCCTTCCGCTGTCTCT20.14398848092152627No Hit
AGCCTAGACATCCACTGCTTCCGACGAGTGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCAACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTTGTAATGATCCTTCCGCTGTCTCTTATACAC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGGGGTGGTAATGATCCTTCCGCTGTCTCTTA20.14398848092152627No Hit
AGCCTAGACATCCACTGATGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGGTGTGGTAATGATACTTCCGCTGTCTCTTA20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGCCGGCCGTATGTGGTAATGATCCTTCCGCT20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGTAAAGAAGTGGTAATGATCCTTCAGCTGTC20.14398848092152627No Hit
AGCCTAGACATCCACTGCTGGCTCGGAGATGTGGTAATGATCCTTCCGCC20.14398848092152627No Hit
AGCCTAGACATCAACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA20.14398848092152627No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)