FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve777.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve777.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences86
Sequences flagged as poor quality0
Sequence length301
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT3743.02325581395349No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT78.13953488372093No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT66.976744186046512No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT44.651162790697675No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC33.488372093023256No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC33.488372093023256No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT33.488372093023256No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC22.3255813953488373No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC22.3255813953488373No Hit
AGCCTAGACATCCACTGTTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC11.1627906976744187No Hit
ACACCGTGGAAGCCGCCGGAGACCTTGTACGAGCCCCCTTCCTGGTTCTC11.1627906976744187No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAATAAAAGCAAGGACTTT11.1627906976744187No Hit
AGCTTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT11.1627906976744187No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTTCGCTGTCTCT11.1627906976744187No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT11.1627906976744187No Hit
AGCCTAGACATCAACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT11.1627906976744187No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGAAAATGATCACAAAAACTTT11.1627906976744187No Hit
CACCTAGACATCCACTGCTAAAAGTTGTTATCTAATTAACAGCAGAGACT11.1627906976744187No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTGTAAATAAAAGCAAGGACTTT11.1627906976744187No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTGTAAATAAAAGCAAGGACTTT11.1627906976744187No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAACAAGGACTT11.1627906976744187No Hit
ACCCTATACATCCTCTTCTGAAAGTTGTTTTAAAAAAAAAAAAAACCTCT11.1627906976744187No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT11.1627906976744187No Hit
AGCCTATACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT11.1627906976744187No Hit
CCCCCCTCTCCCCCCCCCGCACCCCCGCCCCCCTCCCTCCCCCCCTTCCC11.1627906976744187No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT11.1627906976744187No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT11.1627906976744187No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT11.1627906976744187No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)