FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OODve770.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OODve770.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8826
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT346939.30432812145933No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT258429.27713573532744No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT4585.189213686834353No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT4465.053251756174937No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1731.960117833673238No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAACTT1111.257647858599592No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATGGATTAAAACCAAAAACTT580.6571493315205076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT280.3172445048719692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTTAGGATTAAAACCAGAGACTT280.3172445048719692No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT280.3172445048719692No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT270.30591434398368456No Hit
AGCCTAGACATCCACTGCTGTCTGTGGTAATGATCCTTCCGCTGTCTCTT260.29458418309539997No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT250.2832540222071153No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT240.27192386131883073No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC240.27192386131883073No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT190.21527305687740766No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAGACTT160.1812825742125538No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACAAAAGACTT160.1812825742125538No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT150.1699524133242692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTAAGAGCAAGGACTT140.1586222524359846No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACCT140.1586222524359846No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGATCAAGGACTT140.1586222524359846No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAATGACTT130.14729209154769998No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT120.13596193065941536No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATTGATTAAAACCAAAGACTT120.13596193065941536No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT120.13596193065941536No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT120.13596193065941536No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGGTTAAAACCAAAGACTT120.13596193065941536No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTC120.13596193065941536No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT120.13596193065941536No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGGCTT120.13596193065941536No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT110.12463176977113076No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATTGATTAAAACCAAAGACTT110.12463176977113076No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGTAAGAGCAAGGACTT110.12463176977113076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT110.12463176977113076No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT110.12463176977113076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAGCCAAAGACTT110.12463176977113076No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTAAGAGCAAGGACTT100.11330160888284614No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATTGATTAAAACCAAAGACTT100.11330160888284614No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT100.11330160888284614No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT90.10197144799456152No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT90.10197144799456152No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGGCTT90.10197144799456152No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT90.10197144799456152No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTGATTAAAACCAAAGACTT90.10197144799456152No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAGAGACTT90.10197144799456152No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT90.10197144799456152No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)