FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi759.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi759.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2977
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT132444.47430298958683No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT79626.738327175008397No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC923.0903594222371518No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGCAAGAACT531.7803157541148806No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT230.7725898555592879No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT170.5710446758481693No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAGGGACTTT140.47027208599261006No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT140.47027208599261006No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT130.43668122270742354No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT130.43668122270742354No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGGCTTT120.40309035942223714No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAGATAAAAGCAAGGACTTT110.3694994961370507No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT90.3023177695666779No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAACTTT80.26872690628149143No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTC80.26872690628149143No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCGAACGCAAAAACTTT80.26872690628149143No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTCT80.26872690628149143No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTGTAAATAAAAGCAAGGACTTT80.26872690628149143No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT70.23513604299630503No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACCTT70.23513604299630503No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT70.23513604299630503No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT60.20154517971111857No Hit
AGCCTAGACATCAACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT60.20154517971111857No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTGAACGCAAAAACTTT60.20154517971111857No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTGTAAATAAAAGCAAGGACTTT60.20154517971111857No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTGAACGCAAAAACTTT60.20154517971111857No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTGTAAATAAAAGCAAGGACTTT50.16795431642593214No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACCTT50.16795431642593214No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAGTAAAAGCAAGGACTTT50.16795431642593214No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT50.16795431642593214No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAGGCAAGGACTTT50.16795431642593214No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAGAGCAAGGACTTT50.16795431642593214No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTAAATAAAAGCAAGGACTTT50.16795431642593214No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTCT40.13436345314074571No Hit
AGCCTAGACATCCACTGCTGACAGTTGTTGTAAATAAAAGCAAGGACTTT40.13436345314074571No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT40.13436345314074571No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAGCGCAAAAACTTT40.13436345314074571No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTAAATAAAAGCAAGGACTTT40.13436345314074571No Hit
AGTCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.10077258985555929No Hit
AGCCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTGAACGCAAAAACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAGAACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAAAGTTGGTGTAAATAAAAGCAAGGACTTT30.10077258985555929No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGTTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCGAGGACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTGAACGCAAAAACTTT30.10077258985555929No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC30.10077258985555929No Hit
AGCCTAGACATCCCCTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTC30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAATGACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTGTAAATAAAAGCAAGGACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT30.10077258985555929No Hit
AGCCTAGAAATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT30.10077258985555929No Hit
AGCCTAGACATCCACTGCTGAAAGATGTTGTAAATAAAAGCAAGGACTTT30.10077258985555929No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)