FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi758.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi758.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1368
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT51137.353801169590646No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC684.970760233918129No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC382.7777777777777777No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC241.7543859649122806No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT191.3888888888888888No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGATGTGGTAATGAT191.3888888888888888No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC161.1695906432748537No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT161.1695906432748537No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT141.023391812865497No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGTAATGATCCTTCCGCTGTC141.023391812865497No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATGATCCTTCCGCTGTCTC130.9502923976608186No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT120.8771929824561403No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA120.8771929824561403No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGTCTCT100.7309941520467835No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT100.7309941520467835No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT90.6578947368421052No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACCGTGGTAATGATCCTTCC90.6578947368421052No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCAGCTGTCTCT70.5116959064327485No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTCTCT70.5116959064327485No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT60.43859649122807015No Hit
AGCCTAGACATCCACTGCTGTATCGTGGTAATGATCCTTCCGCTGTCTCT50.36549707602339176No Hit
AGCCTAGACATCCACTGCTGTCTAGTGGTAATGATCCTTCCGCTGTCTCT50.36549707602339176No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA50.36549707602339176No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCATTCCGCTGTCTCT50.36549707602339176No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTAT50.36549707602339176No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCTCTGTCTCT50.36549707602339176No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCG50.36549707602339176No Hit
AGCCTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT50.36549707602339176No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT40.29239766081871343No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT40.29239766081871343No Hit
AGCCTAGACATCCACTGCTGGTGTCGTGTCTCGTGGTAATGATCCTTCCG40.29239766081871343No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCTGCTGTCTCT30.21929824561403508No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGTTCGGAGATGTGTATAAGAGA30.21929824561403508No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCC30.21929824561403508No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT30.21929824561403508No Hit
AGCCTAGACATCCACTGCTGTCTGGTGGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTCTCGTGGTAATGATCCTTCCG20.14619883040935672No Hit
AGCCTAGACATCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGATAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCATTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACACCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGACTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTTT20.14619883040935672No Hit
AGCCTAGACATCAACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCGCGTGGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGTCGGAGATGTGTATAAGAGAC20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGGTGTCGTGTCTTGACTATCAAGCTAGTCTC20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCACT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTTGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCCGGAGATGTGTATAAGAGAC20.14619883040935672No Hit
AGCCTAGAAATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGGTCAGATGTGGTAATGATCCTTCCGCTGTC20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCGACGAGTGGTAATGATCCTTCCGCTGTC20.14619883040935672No Hit
AGCCTAGACATCCACTGATGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGGTCTAGTGGTAATGATCCTTCCGCTGTCTC20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCTCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGACTCGTGGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCCGTCTCGTGGGCTCGGAGATGTGTATAAGAGA20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATAATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCAACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATTATCCTTCCGCTGTCTCT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTTGTAATGATCCTTCCGCTGT20.14619883040935672No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT20.14619883040935672No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)