FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi757.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi757.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1560
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT81252.05128205128206No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC694.423076923076923No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC603.8461538461538463No Hit
AGCCTAGACATCCACTGCTGACGTGGTAATGATCCTTCCGCTGTCTCTTA332.1153846153846154No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT221.4102564102564104No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT201.282051282051282No Hit
AGCCTAGACATCCACTGCTGCGTGGTAATGATCCTTCCGCTGTCTCTTAT191.217948717948718No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGTAATGATCCTTCCGCTGTC191.217948717948718No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA181.153846153846154No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTCTCT110.7051282051282052No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATGATCCTTCCGCTGTCTC100.641025641025641No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT90.576923076923077No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT90.576923076923077No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGTTCGGAGATGTGGTAATGATC80.5128205128205128No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA80.5128205128205128No Hit
AGCCTAGACATCCACTGCTGTATCGTGGTAATGATCCTTCCGCTGTCTCT70.4487179487179487No Hit
AGCCTAGACATCCACTGCTGACGACGAGTGGTAATGATCCTTCCGCTGTC60.38461538461538464No Hit
AGACTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT60.38461538461538464No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTTTCT60.38461538461538464No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACTTCCGCTGTCTCT60.38461538461538464No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT60.38461538461538464No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGTCTCT50.3205128205128205No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT50.3205128205128205No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCG50.3205128205128205No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATAATCCTTCCGCTGTCTCT50.3205128205128205No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCATTCCGCTGTCTCT50.3205128205128205No Hit
AGCCTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT50.3205128205128205No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC50.3205128205128205No Hit
AGCCTAGACATCCACTGCTGTCTCGTGTAATGATCCTTCCGCTGTCTCTT40.2564102564102564No Hit
AGCCTAGACATCCACTGCTGGTCTTGTGGTAATGATCCTTCCGCTGTCTC40.2564102564102564No Hit
AGCCTAGACATCCACTGCTGTCTAGTGGTAATGATCCTTCCGCTGTCTCT40.2564102564102564No Hit
AGCCTAGACATTCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT40.2564102564102564No Hit
CGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT40.2564102564102564No Hit
AGCCTAGACATCCACTGCTGGTTCGTGGTAATGATCCTTCCGCTGTCTCT40.2564102564102564No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCTTCCGCTGTCTCTT30.19230769230769232No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTCCGCTGTCTCTT30.19230769230769232No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCTCTGTCTCT30.19230769230769232No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT30.19230769230769232No Hit
AGCCTAGACATCCACTGCTGGTGTCGTGTCTCGTGGTAATGATCCTTCCG30.19230769230769232No Hit
AGCCTAGACATCCACTGCTGTCGCGGCAGCGTCAGATGTGGTAATGATCC30.19230769230769232No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATTATCCTTCCGCTGTCTCT30.19230769230769232No Hit
AGCCTAGACATCCACTGATGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCCGTGGTAATGATCCTTCCGCTGTCTCTT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGGTGGTGGTAATGATCCTTCCGCTGTCTCTT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGCCGACGAAGTCTGTGGTAATGATCCTTCCG20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTATTATACACATCTGACGCTGCGACGAG20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTTCGTGGTAATGATCCTTCCGCTGTCTCTT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGAACCTGTCGCTGACACT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGGCTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCTGCTGTCTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGACTCT20.1282051282051282No Hit
AGCCTAACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGACGCTGCCGACGAGTGGTAATGATCCTTCC20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCCCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGTTGTCTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTCCGCTGTCTCT20.1282051282051282No Hit
AGCCTAGACATCCACCGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.1282051282051282No Hit
AGCATAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGATGCCGACGGTGGTAATGATCCTTCCGCTGTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTTCCGACGAGTGGTAATGATCCTTCCGCTGTC20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCGCTGTCTCTT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTTGTAATGATCCTTCCGCTGTCTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTACGCTGTCTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCCGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.1282051282051282No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCCC20.1282051282051282No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)