FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi756.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi756.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences171
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT9354.385964912280706No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC63.508771929824561No Hit
AGCCTAGACATCCACTGCTGGTGTATAAGAGACAGTGGTAATGATCCTTC63.508771929824561No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC52.923976608187134No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT21.1695906432748537No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC21.1695906432748537No Hit
AGCCTAGACATCCACTGCTGTATCGTGGTAATGATCCTTCCGCTGTCTCT21.1695906432748537No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT21.1695906432748537No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGTAATGATCCTTCCGCTGTC21.1695906432748537No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.5847953216374269No Hit
AGCCTAGAGATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA10.5847953216374269No Hit
AGCCTAGAAATCCACTGATGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTGAACACCACCGCTGTGTGGTGAGCCCTCCGCTGTATATAAGAGAC10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTCTCGTGGTAATGATCCTTCCG10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTACGCTGTCTCTTATA10.5847953216374269No Hit
AGCCTAGACATACACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTACGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTTCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACACCCACTGCTGTATCGTGGTAATGATCCTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACACCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTCCCGTGGTAATGATCCTTCCG10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTGTCGTGGTAATGATCCTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGACACGTGGTAATGATCTTTCCGCTGACTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTAT10.5847953216374269No Hit
AGCCTAGACATCTACTGCTGTCTCGTGGAATGATCCTTCCGCTGTCTCTT10.5847953216374269No Hit
CCACTTGCGGCTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.5847953216374269No Hit
AGCCTAGACATCCGCTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCC10.5847953216374269No Hit
TCACTTGCGGCTGAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA10.5847953216374269No Hit
TCACTTGCGGTTGGACTGGGAAACATTGTTCACACGCTCAGCCGAAGGCT10.5847953216374269No Hit
TCACTTGCGGCTGAACTGGGAAACATTGTTCACACGCCCAGCCGAAGGCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTTCGCTGTCTCT10.5847953216374269No Hit
TCACTTTCGGTTCGACCGGGAAACATTGTTCACACGCCCAGCCGAATGCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTGT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTAGGAGTGGTAATGATCCTT10.5847953216374269No Hit
TCACTTGCGGTTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.5847953216374269No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATACACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTATCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCG10.5847953216374269No Hit
AGCCTAGACATCTACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATGCTTCCGCTGTC10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTCCGTTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCAGATGTGGTAATGATCCTTCCGCTGTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCAGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGGCTCGGAGATGTGGTAATGATCCTTCCGCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGTAATGATCCTTCCGCTGTCTCTT10.5847953216374269No Hit
CCACACCAATCACCGTGATTCCGTCATTGTATATTTCAACCCCCCCATAT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGCGGAGATGTGTATAAGAGACAGTGGTAATG10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAAAATAAAAGCAGAGAC10.5847953216374269No Hit
AGCCTAGACACCCACTGCTGTCTCGTGGTAATGATTCTTTCGCTGTCTCT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGCGACGACGTCTCGTGGTAATGATCCTTCCG10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGTTCGTGGTAATGATCCTTCCGCTGTCTCTT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT10.5847953216374269No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.5847953216374269No Hit
AGCCTAGACATACACTGCTGTTCGTGGTAATGATCCTTCCGCTGTCTCTT10.5847953216374269No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)