FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi755.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi755.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1266
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT52641.54818325434439No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC897.03001579778831No Hit
AGCCTAGACATCCACTGCTGTCCGTGGTAATGATCCTTCCGCTGTCTCTT403.15955766192733No Hit
AGCCTAGACATCCACTGCTGTGTCTCGTGGTAATGATCCTTCCGCTGTCT332.6066350710900474No Hit
AGCCTAGACATCCACTGCTGAGTGGTAATGATCCTTCCGCTGTCTCTTAT312.448657187993681No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCGCTGTCTCTTA302.3696682464454977No Hit
AGCCTAGACATCCACTGCTGACGACGTGGTAATGATCCTTCCGCTGTCTC211.6587677725118484No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC191.5007898894154819No Hit
AGCCTAGACATCCACTGCTGGGCTCGGAGATGTGGTAATGATCCTTCCGC141.1058451816745656No Hit
AGCCTAGACATCCACTGCTGCCGACGGTGGTAATGATCCTTCCGCTGTCT141.1058451816745656No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT131.0268562401263823No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGTGGTAATGATCCTT100.7898894154818324No Hit
AGCCTAGACATCCACTGCTGGCTCGGAGATGTGGTAATGATCCTTCCGCT100.7898894154818324No Hit
AGCCTAGACATCCACTGCTGGTGTCTCGTGGTAATGATCCTTCCGCTGTC90.7109004739336493No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTCTCT80.631911532385466No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGGCTCGGAGATGTGGTAATGATC80.631911532385466No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT70.5529225908372828No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT60.47393364928909953No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT60.47393364928909953No Hit
AGCCTAGACATCCACTGCTGTCTAGTGGTAATGATCCTTCCGCTGTCTCT50.3949447077409162No Hit
AGCCTAGACATTCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT50.3949447077409162No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTTT50.3949447077409162No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATAATCCTTCCGCTGTCTCT50.3949447077409162No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATTATCCTTCCGCTGTCTCT50.3949447077409162No Hit
AGCCTAGACATCCACTGCTGTCTCTTATACACATCTGACGCTGCCGACGA50.3949447077409162No Hit
AGCCTAGACATCCACTGCTGTTCGTGGTAATGATCCTTCCGCTGTCTCTT40.315955766192733No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGTCTCT30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGTATCGTGGTAATGATCCTTCCGCTGTCTCT30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGACGACGAGTGGTAATGATCCTTCCGCTGTC30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACTTCCGCTGTCTCT30.23696682464454977No Hit
AGCCTAGACATCAACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGCCGACGGGTGGTAATGATCCTTCCGCTGTC30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGCCGACGTGGTAATGATCCTTCCGCTGTCTC30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTACGCTGTCTCT30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT30.23696682464454977No Hit
AGCCTAGACATCTACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT30.23696682464454977No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCTTCCGCTGTCTCTT20.1579778830963665No Hit
AGCCTAGACATCAACTGCTGAGTGGTAATGATCCTTCCGCTGTCTCTTAT20.1579778830963665No Hit
AGCCTAGACATCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTAT20.1579778830963665No Hit
AGCCTAGAAATCCACTGCTGACGACGTGGTAATGATCCTTCCGCTGTCTC20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCCGTCTCT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGCTCGTGGTAATGATCCTTCCGCTGTCTCTT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGATGTGGTAATGATCCTTCCTCTGTCTCTTA20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTTCGCTGACTCT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGCTGTCTCGTGGTAATGATCCTTCCGCTGTC20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGCGACGAGTGGTAATGATCCTTCCGCTGTCT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGTACGTGGTAATGATCCTTCCGCTGTCTCTT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGTGTCGTGGTAATGATCCTTCCGCTGTCTCT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTCCGCTGTCTCT20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGGTGTCGTGTCTCGTGGTAATGATCCTTCCG20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGCCGTCGAGTGGTAATGATCCTTCCGCTGTC20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGCCGACGAGGGGTAATGATCCTTCCGCTGTC20.1579778830963665No Hit
AGCCTAGAAATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.1579778830963665No Hit
AGCCTAGACATCCACTGCTGCCTCTTATACACATCTGACGCTGCGACGAG20.1579778830963665No Hit
AGACTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.1579778830963665No Hit
AGCCTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.1579778830963665No Hit
AGCCTAGACATCCACTCCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.1579778830963665No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)