FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi746.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi746.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC6832.22748815165877No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC4521.32701421800948No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT199.004739336492891No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT188.530805687203792No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT31.4218009478672986No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT31.4218009478672986No Hit
TCACTTGCGGTTGAACCGGGAAACATTGTTCACACGCTCAGCCGAAGGCT20.9478672985781991No Hit
AGCCTAGACATACACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC20.9478672985781991No Hit
AGCCTAGGCATCCACTGCTGTCTCGTTGTAATGATCCTTCCGCTGTCTCT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTCATGATCCTTCCGCTGTCTC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTGCTGTCTC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTTGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTAT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATAATCCTTCCGCTGTCTC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTA10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGTGTCTCT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATTATCCTTCCGCTGTCTCT10.47393364928909953No Hit
AGCCTAGACATCCACTGATGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCAGCTGTCTCT10.47393364928909953No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT10.47393364928909953No Hit
ACTCCATGGAAGCCTCCTGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGCCGACGGGTGGTAATGATCCTTCCGCTGTC10.47393364928909953No Hit
AGCCTAGACATTCACTGCTGACGAGTGGCAATGATCCTTTCGCTGTCTCT10.47393364928909953No Hit
ACCCCGTGAAGGCCGCCGGACACCTTGTAGGCATTGTCGTCCGATGTGTT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAGTGATCCTTCCGCTGTCTCT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTAACGAGTGGTAATGATCCTTCCGCTGTCTCT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATTATCCTTCCGCTGTCTCT10.47393364928909953No Hit
ACGCCGTGAAGGCCACCGGAGGTTTCGTAGGCCTTGGAATCGAATTTGCC10.47393364928909953No Hit
TCACTTGCGGCTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.47393364928909953No Hit
AGTCTAGACATCCACTGCTGCCGACGAGTGGTAATGACCCTTCCGCTGTC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTA10.47393364928909953No Hit
ACACCGTGGAGACCTCCGGAGGTCTTGTCGCCGGATCCGCCGTACTTCCC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGATCTCGTGGTAATGATCCTTCCGCTGTCTC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATTATCCTTCCGCTGTC10.47393364928909953No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCATTGTTAAAAGT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATTATCCTTCCGCTGTCTC10.47393364928909953No Hit
CGCCTAGACATCCACTGCTGTCTCGTGTTAATGATCCTTCCGCTGTCTCT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCATTCCGCTGTCTCT10.47393364928909953No Hit
AGCCTAGAAATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT10.47393364928909953No Hit
CGCCTAGACATCCACTGCTGGTCTCGTTGTAATGATCCTTCCGCTGTCTC10.47393364928909953No Hit
AGCCTAGAAATCCACTGATGGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.47393364928909953No Hit
TCACTTGCGGTTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.47393364928909953No Hit
AACCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.47393364928909953No Hit
ACCCCGTGGAAGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC10.47393364928909953No Hit
AGCCTAGACATCCACTGCCGCCGACGAGTGGTAATGATCCTTCCGCTGTC10.47393364928909953No Hit
GCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.47393364928909953No Hit
AGCCTAGACATCCATGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCTT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGATGTCTCT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAGATACT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAAACT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGGTCTGGTGGTAATGATCCTTCCGCTGTCTC10.47393364928909953No Hit
TCACTTGCGGCTGAACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGAAGAGTGGTAATGATCCTTCCGCTGTCTTT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTCGTCTCGTGGTAATGATCCTTCCGCTGTCTC10.47393364928909953No Hit
CGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.47393364928909953No Hit
TCACTTGCGGTTCGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC10.47393364928909953No Hit
CGGCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGCCAAAAGT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTGGATTAAAACCAAGACTTT10.47393364928909953No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCCGTCTC10.47393364928909953No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)