FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi742.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi742.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences818
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[FAIL]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT35443.27628361858191No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT15018.337408312958438No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA769.290953545232274No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC364.400977995110025No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTC60.7334963325183375No Hit
AGCCTAGAAATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT50.6112469437652812No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT50.6112469437652812No Hit
AGCCTAGACATCAACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT50.6112469437652812No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTGAACGCAAAAACTTT40.4889975550122249No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCGAAAACTTT40.4889975550122249No Hit
AGCCTAGACATACACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT30.36674816625916873No Hit
AGCCTAGACATCCACTGCTGGTAATGATCCTTCCGCTGTCTCTTATACAC30.36674816625916873No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT30.36674816625916873No Hit
AGCCTAGACATCCACTGCTGTAGTGGTAATGATCCTTCCGCTGTCTCTTA30.36674816625916873No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGCCGTGGTAATGATCCTTCCGCTGTCTCTTA20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACCTT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTTAACGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAGAACTTT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGTCCCGTGGTAATGATCCTTCCGCTGTCTCT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATAATCCTTCCGCTGTCTCT20.24449877750611246No Hit
AGCCTAGATATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCGAACGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAGAAACTTT20.24449877750611246No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGAAATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT20.24449877750611246No Hit
AGCATAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGACATCCACTGTTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAGCTTT20.24449877750611246No Hit
AGCCTAAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTCT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTTT20.24449877750611246No Hit
CGCCTAGACATCCACTGCTGACAGTTTGTGGAAGTGAACGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAGCGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGACATCAACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT20.24449877750611246No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGTAAGTGAACGCAAAAACTTT20.24449877750611246No Hit
AGCCTAGACATCCATTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
CGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGTTGTCTCT10.12224938875305623No Hit
AGACTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTAGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTATGATCCTTCCGCTGTCTCTT10.12224938875305623No Hit
AGCCTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAACTTTT10.12224938875305623No Hit
AGCCTAGACACCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAACTAAAAAT10.12224938875305623No Hit
TGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCCTT10.12224938875305623No Hit
AGCGTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCAATGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATTCACTGCTGTCTCGTGGTAATGATTCTTTCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTACGCTGTCTCTTATAC10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTTTGGGTTAAAACCAAAGACTT10.12224938875305623No Hit
AGACTAGACATACACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.12224938875305623No Hit
ACCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTC10.12224938875305623No Hit
AACCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
AGTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTCG10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTCCGCTGTCTCT10.12224938875305623No Hit
AACCCAGAAATCCCCTGCTGAAAGTTTGTGGGAGTGAAAACAAAAAATTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.12224938875305623No Hit
AGCCAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTAT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGACAGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTCATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACACCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGTTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCACGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTT10.12224938875305623No Hit
AGCCTAGACATCCACTCCTGTCCCGTGGGCTGGGTGTGGTAAAGATCGTT10.12224938875305623No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCATTCCGATGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAACACTTT10.12224938875305623No Hit
AGCCTAGACATTCATTGCTGAAAGTTTGCGGAAGCGTAAGCAAAAATTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGACCTTCCGCTGTCTCTTAT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTTGTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTCGT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTACGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTT10.12224938875305623No Hit
AGCCTAGATACTTACTGTCGTCTCGTGGTAATGATTCTTTCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAGCTTT10.12224938875305623No Hit
TCACTTGCGGCTGAACTGGGAAACATTGTTCACACGCTCAGCCGAAGGCT10.12224938875305623No Hit
GTACGTCATCCCCACCTTCCTCCGGTTTGTCACCGGCGGTCTCCTTAGAG10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCGCTGTCTCTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTATCGTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
CGCCTAGACATCCACTGTGGTAATGATCCTTCCGCTGTCTCTTATACACA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGATAC10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATAATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT10.12224938875305623No Hit
TCCACATTTCCATACGCATCGGCCTTTTTTGCTCTTTCTGTTCTTTTCTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTTGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTGGTAATTATCCTTCCGCTGTCTCTTATAC10.12224938875305623No Hit
TCACTTGCGGTTGAACTGGGAAACATTGTTCACACGCTCAGCCGAAGGCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAACGTTTGTGGAAGTGAACGCAAAATCTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCATCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATACTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCCAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACCTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATTATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAAACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
CGGCTGCGTTCTTCATCGATGCGCAAGCCAAGAGATCCGTTGTTGAAAGT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACTTCCGCTGTCTCT10.12224938875305623No Hit
GAGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTTAACGCAAAAACTT10.12224938875305623No Hit
AGTCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT10.12224938875305623No Hit
AACCTAATCCTACCTTGTTTTTTTTCTGTTATGATCCTTTTGCCCTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGACCTTCCGCTGTCTATT10.12224938875305623No Hit
CCTCTCTTCATTCCTCCTTCCTTCTTTTCCCCTCTTCCTTCCACCTTTTT10.12224938875305623No Hit
TTCCTTCCCTATTCCTCCGTTTCCTGCCCTCTTTATCCTCTCTTCACCTC10.12224938875305623No Hit
AGCCTAGACATCCACTGCCGTCTCGTGGTAATAATCCTTCCGCTGTCTCT10.12224938875305623No Hit
CCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGACGCAAAAACTTTC10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.12224938875305623No Hit
AGCCTATACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
ACCCCATTCACACCTCCTGACTCTTTGTACGCTTTTTCATCTACCTTCCC10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAACAACTTT10.12224938875305623No Hit
TCACTTGCCGTTGGACTGTGAAACATTGTTCACACGCTCAGCCGAAAGCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATTCTTCCGCTGTCCTT10.12224938875305623No Hit
TCCCTTGCGGCTCGACCGGGAAACATTGTTCACACGCTCAGCCGAAGGCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGCAGTGAACGCAACAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGTACGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACACAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTTGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
CGGCTACATTCTTCATCCATTCGTAATCAACGTTATGCTGTGTTATATGC10.12224938875305623No Hit
AGCCTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTATCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTC10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTGAACGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
ATCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCCTGTCTCTT10.12224938875305623No Hit
AGCCTAGACATCCACTGTTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
CCTAGACAATCCACTGCTGTCGTGTTAATGATCCTTCCGCTGTCTCTTAT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGAAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTTGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGGTCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTACTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTT10.12224938875305623No Hit
AGCCTAGACATATTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTCG10.12224938875305623No Hit
AGCCTAGACATCCACTGCGGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTTTCTTA10.12224938875305623No Hit
GCACTTGCGGTTGGACCGGGAAACATTGTTCACACGCTCAGCCGAAGGCT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAATGCAAAAACTTT10.12224938875305623No Hit
AGCCTAGACATACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTCG10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCTTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTC10.12224938875305623No Hit
AGGCCTAGACATCCACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTT10.12224938875305623No Hit
CGCCTAGATATACACTCCTGACAGTTGGCGGAAGTGAACTCAAAGACTTT10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTCTCTAGTAAGAGCAAGGACTT10.12224938875305623No Hit
AGCCTAGACATACACTGCTGTCGTGGTAATGATCCTTCCGCTGTCTCTTA10.12224938875305623No Hit
AGCCTAGACATCCACTGCTGTCGTGGTAATGATCTTTCCGCTGTCTCTTA10.12224938875305623No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)