FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi716.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi716.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences934
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT17318.52248394004283No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC12813.704496788008566No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT717.601713062098502No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT626.638115631691649No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACT545.781584582441114No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT515.460385438972163No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGATTGAAAGCAAAGACT485.139186295503212No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT373.961456102783726No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT343.640256959314775No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAAGACT232.462526766595289No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT202.141327623126338No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT171.8201284796573876No Hit
AGCCTAGACATCCACTGCTGTGTGGTAATGATCCTTCCGCTGTCTCTTAT131.3918629550321198No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT70.7494646680942184No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTCAAAGCAAGAACT70.7494646680942184No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC60.6423982869379015No Hit
AGCCTAGACATCCACTGCTGTCGGCGCGCAGTGGTAATGATCCTTCCGCT60.6423982869379015No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTCT50.5353319057815845No Hit
AGCCTAGACATACACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC40.4282655246252677No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC30.32119914346895073No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTGTCTAGTTCAAAGCAAGAACT30.32119914346895073No Hit
AGCCTAGACATCCACTGCTGTCTCTGTGGTAATGATCCTTCCGCTGTCTC30.32119914346895073No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAGGAACT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTTAAAAGCAAAGACT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGGTTAAAACCAAAGACTT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATACTTCCGCTGTCTCTTATAC20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTAACA20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTGAACGCAAAAACTTT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGATGTCTCTTATAC20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGAACT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGTGGTAATGAACCTTCCGCTGTCTCTTATAC20.21413276231263384No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATGC20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGCTCAAAGCAAGAACT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCGAAGCAAGAACT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAATAACT20.21413276231263384No Hit
AGCCTAGACATCCAATGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACT20.21413276231263384No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTATCTTATAC20.21413276231263384No Hit
AGCCTAGACATCCACTGCTTAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTTTGTGGTAATGATCCTTCCGCTGTCTCTTAT10.10706638115631692No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGTCTAGACATTCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.10706638115631692No Hit
AGCCTAGGACATCCACTGCTGTGGTAATGATCCTTCGGCTGTCTCTTATA10.10706638115631692No Hit
ACCCAAGACATCCTCCGCAGAAAGGTGTTATTTTGTAAAAAACGAGAAAT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGGCTCGGAGTGGTAATGATCCT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTAT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGATTGAAAGTAAAGACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTTAAAAGCAAGAATC10.10706638115631692No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTACGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCAACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCGGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAATCAAGAACT10.10706638115631692No Hit
CCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTCG10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCAGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGCTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGATTTAAAGCAAAGACT10.10706638115631692No Hit
AGCCTCGACATCCACTGCTGAAAGTTGCTATCTAGTTCAACGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCAACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTCGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCCATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATTGATTAAAACCAAAGACTT10.10706638115631692No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.10706638115631692No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGATTGAGAGCAAATACT10.10706638115631692No Hit
AGCCTAGACATACATCCACTGCTGTAAGTTGTTATTGATTAAAACCAAAG10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATACTTCCGCTGTCTAT10.10706638115631692No Hit
AGCCTAGACATCTACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCGACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATTGATTAAAACCAAAGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGATTGAAAGCAGAGACT10.10706638115631692No Hit
AGCCTAGACATCCACTCCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTTTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTCCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGCAAGGACTT10.10706638115631692No Hit
AGCATAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.10706638115631692No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTCTCGGGGTAATGATCCTTCCGCTGTCTCT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCGAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAGATAAAAGCAAGGACTTT10.10706638115631692No Hit
ATCCTAGACATCCACTGCTGAAAGTTGTTATCTGATTGAAAGCAAAGACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTGTAAATAAAAGCAAGGACTTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGTAAGAACT10.10706638115631692No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT10.10706638115631692No Hit
AGCCTAGACATCCACTGCGGAAAGCTGTTACCTAGTAAGAGCAAGGACTT10.10706638115631692No Hit
ATTCTAGATTTCCACTGCTGAAAGTTGTCATTGACTAAAACCAAAGCCTT10.10706638115631692No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT10.10706638115631692No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTGATTGAAAGCAAAGACT10.10706638115631692No Hit
AGCCTAGACACCCACTGCTGTCTCGTGGTAACGAGACTTCAGTCATCGCT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGGAAGTTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCAGATTGAAAGCAAAGACT10.10706638115631692No Hit
CCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTTTC10.10706638115631692No Hit
GCCGAGACATCCACTGCTGAAAGTCTGTGGAAGTGAACGCAAAAACTTTC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAGTAAAAGCAAGGACTTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATTATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTCGGCGCGCAGTTGTAATGATCCTTCCGCT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTAATTAAAACCAAAGACTT10.10706638115631692No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAAGACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATTGATTAAAACCAAAGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCTGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGTGGTAAATGATCCTTCCGCTGTCTCTTA10.10706638115631692No Hit
AGCCTAGACCATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAAC10.10706638115631692No Hit
TGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAGAGCAAAGACT10.10706638115631692No Hit
AGCCTAGACATCCCCTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACACCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTCGTCGGCAGCGTCAGATGTGGTAATGATC10.10706638115631692No Hit
GGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCTCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTATCT10.10706638115631692No Hit
AGCCTATACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTAACTAGTAAGAGCAAGGACTT10.10706638115631692No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGATGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTAAAC10.10706638115631692No Hit
AGCCTAGACATCCATTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCGAGAACTT10.10706638115631692No Hit
AGCCTAGACATCCACCGCTGTCGGCGCGCAGCGGTAATGAACCGTTCGCT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTAAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAAC10.10706638115631692No Hit
AGCCTAGACATCGACTGCTGGAAGTTGTTATTGATTAAAACCAAAGACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTTGGGTAATGAACCTTCCTCTGTCTCTTATAC10.10706638115631692No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT10.10706638115631692No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCATTCCGCTGTCTCT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTTGTAAGAGCAAGGACTC10.10706638115631692No Hit
AGCCTAGACATCCACTGTTGAAAGTTGCTATCTAGTTCAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACT10.10706638115631692No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTTTTATAC10.10706638115631692No Hit
AGCCTAGACACCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTTC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTAAGAGCAAGGACTT10.10706638115631692No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT10.10706638115631692No Hit
AGCCTAGAAATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT10.10706638115631692No Hit
AGCCTAGACACCACTGCTGAAAGTTGCTATCTAGTTCAAAGCAAGAACTT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTTGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGGGAACT10.10706638115631692No Hit
CGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTCAAAGCTAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGCCTCGTGGTAATGATCCTTCCGCTGTCTCT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTTAAAGGAAGAGAT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTCTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTGATTGAAAGCAAAGACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGCTCGGAGATGTGGTAATGATC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTTAAAGCAAGAACT10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTGTCTCTATACA10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGAATGTTGTTATCTAGTAAAAGCAAGGACTT10.10706638115631692No Hit
CGACTAGACATCCACTGCTGTGGTAATGATCCTTACGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGAATCTTCCGCTGTCGCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGATCCTTCCGCTTTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACACCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT10.10706638115631692No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTATCTGATTGAAAGCAAAGACT10.10706638115631692No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATTGATTAAAACCGAAGACTT10.10706638115631692No Hit
AGCCTAGACATCCCTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGAACCT10.10706638115631692No Hit
AGCCTAGAAATACACTGCTGTGGTAATGATCCTTCCGCTGTCTCTTATAC10.10706638115631692No Hit
AGCCTAGACATCCACTGCTGTGGTAATGACCTCCGCTGTCTCTTATACAC10.10706638115631692No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)