FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi696.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi696.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8747
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT689478.81559391791471No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1301.4862238481765175No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT1021.1661140962615753No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT660.7545444152280781No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT620.7088144506688008No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTAAACGCAAAAACTTT420.4801646278724134No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTCT420.4801646278724134No Hit
AGCCTAGAAATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT410.468732136732594No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACCTT410.468732136732594No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTAAACGCAAAAACTTT360.4115696810334972No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAGCGCAAAAACTTT340.3887046987538585No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT330.37727220761403907No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTAAACGCAAAAACTTT310.3544072253344004No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTAAACGCAAAAACTTT300.342974734194581No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAGACGCAAAAACTTT290.33154224305476165No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTAAACGCAAAAACTTT280.3201097519149423No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTAAACGCAAAAACTTT260.2972447696353035No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT240.2743797873556648No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAGAAACTTT240.2743797873556648No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTC240.2743797873556648No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCGAAAACTTT230.26294729621584545No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT220.2515148050760261No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTAAACGCAAAAACTTT210.2400823139362067No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCAAACGCAAAAACTTT200.22864982279638732No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTAAACGCAAAAACTTT200.22864982279638732No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAGACTTT200.22864982279638732No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTAAACGCAAAAACTTT190.21721733165656798No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTAAACGCAAAAACTTT180.2057848405167486No Hit
AGCCTAGACATCCACTGCTTAAAGTTTGTGGAAGTAAACGCAAAAACTTT170.19435234937692925No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT160.18291985823710985No Hit
AGCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTTC160.18291985823710985No Hit
AGCCTAGACATCAACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT150.1714873670972905No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTTGAAGTAAACGCAAAAACTTT130.14862238481765175No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT130.14862238481765175No Hit
AGCCTAGACATCTACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT120.1371898936778324No Hit
AGCCTAGACATCCACTGCTGTAAGTTTGTGGAAGTAAACGCAAAAACTTT120.1371898936778324No Hit
AGCCTAGACATTCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT120.1371898936778324No Hit
AGCCTATACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT120.1371898936778324No Hit
GCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTTC110.12575740253801304No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACACAAAAACTTT100.11432491139819366No Hit
AGCCTAGACATCCACTGCCGAAAGTTTGTGGAAGTAAACGCAAAAACTTT100.11432491139819366No Hit
AGCATAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT100.11432491139819366No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAACTTTC90.1028924202583743No Hit
AGCCTAGACATCCACTGCTGACGAGTGGTAATGATCCTTCCGCTGTCTCT90.1028924202583743No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAGAACTTT90.1028924202583743No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAATAAACGCAAAAACTTT90.1028924202583743No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)