FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOChi688.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOChi688.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25128
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT2110783.9979305953518No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT1340.5332696593441579No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTAAACGCAAAAACTTT1200.4775549188156638No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT1030.40990130531677815No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTAAACGCAAAAACTTT1000.3979624323463865No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAGCGCAAAAACTTT970.3860235593759949No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAGACGCAAAAACTTT950.37806431072906715No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACCTT930.37010506208213945No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTAAACGCAAAAACTTT880.35020694046482015No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTCT870.34622731614135627No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTAAACGCAAAAACTTT850.3382680674944285No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAGAAACTTT840.3342884431709647No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAGACTTT820.3263291945240369No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTC770.3064310729067176No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTAAACGCAAAAACTTT750.29847182425978985No Hit
AGCCTAGACATCAACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT740.294492199936326No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTAAACGCAAAAACTTT680.27061445399554285No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAGCTTT670.26663482967207897No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTAAACGCAAAAACTTT650.2586755810251512No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTAAACGCAAAAACTTT620.2467367080547596No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTAAACGCAAAAACTTT600.2387774594078319No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCGAAAACTTT600.2387774594078319No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTAAACGCAAAAACTTT590.23479783508436802No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAGAACTTT580.23081821076090417No Hit
AGCCTATACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT500.19898121617319325No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT480.19102196752626552No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTTGAAGTAAACGCAAAAACTTT460.18306271887933778No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT460.18306271887933778No Hit
AGCCTAGAAATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT460.18306271887933778No Hit
AGCCTAGACATCCACTGCTTAAAGTTTGTGGAAGTAAACGCAAAAACTTT400.1591849729385546No Hit
AGCCTAGACATCTACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT400.1591849729385546No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACACAAAAACTTT400.1591849729385546No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGTAAGTAAACGCAAAAACTTT380.15122572429162687No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCAAACGCAAAAACTTT360.14326647564469913No Hit
AGCCTAGACATTCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT360.14326647564469913No Hit
AGCATAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT300.11938872970391595No Hit
AGCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTTC280.11142948105698822No Hit
AGCCTAGACATCCATTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT260.10347023241006048No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)