FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOATH652.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOATH652.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6157
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT346856.32613285691084No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT102616.66395972064317No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT2123.443235341887283No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT1923.118401819067728No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC1282.0789345460451516No Hit
AGACTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT290.4710086080883547No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCGAAAACTTT260.4222835796654215No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT250.40604190352444375No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTC210.34107519896053273No Hit
AGCCTAGACATCCACTGCTGAGAGTTTGTGGAAGTAAACGCAAAAACTTT190.30859184667857725No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTCT180.2923501705375995No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT150.2436251421146662No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAGAAACTTT150.2436251421146662No Hit
AGCCTAGACATCCACTGCTGAAAGTTCGTGGAAGTAAACGCAAAAACTTT140.22738346597368847No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAGACGCAAAAACTTT140.22738346597368847No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAGAACTTT140.22738346597368847No Hit
AGCCTAGACATCCACTGCTGAAAGTCTGTGGAAGTAAACGCAAAAACTTT140.22738346597368847No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAGACTTT130.21114178983271076No Hit
AGCCTAGACATCAACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT130.21114178983271076No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGGAGTAAACGCAAAAACTTT130.21114178983271076No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT120.194900113691733No Hit
CGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT120.194900113691733No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTAAACGCAAAAACTTT110.17865843755075525No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGCGAACGCAAAAACTTT110.17865843755075525No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGCGGAAGTAAACGCAAAAACTTT110.17865843755075525No Hit
AGCCTAGACATCCACTGCTGAAGGTTTGTGGAAGTAAACGCAAAAACTTT100.16241676140977748No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAGCGCAAAAACTTT100.16241676140977748No Hit
AGCCTAGACATCCACTGCTGGAAGTTTGTGGAAGTAAACGCAAAAACTTT100.16241676140977748No Hit
AGCCTAGACATCCACTGCTGAAAGTTAGTGGAAGTAAACGCAAAAACTTT100.16241676140977748No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTAAACGCAAAAACTTT100.16241676140977748No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTTGAAGTAAACGCAAAAACTTT90.14617508526879974No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACACAAAAACTTT90.14617508526879974No Hit
AGCCTAGAAATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACTTT90.14617508526879974No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT80.12993340912782197No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAACCTT80.12993340912782197No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTAAACGCAAAAGCTTT70.11369173298684424No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT70.11369173298684424No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC70.11369173298684424No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT70.11369173298684424No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTAAACGCAAAAACTTT70.11369173298684424No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT70.11369173298684424No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)