FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOATH622.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOATH622.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences191
Sequences flagged as poor quality0
Sequence length301
%GC44

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC7539.26701570680628No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT7036.64921465968586No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT31.5706806282722512No Hit
AGCCTAGACATCCACTGCTGAGTGTGGTAATGATCCTTCCGCTGTCTCTT31.5706806282722512No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTGAACGCAAGAACTTT10.5235602094240838No Hit
AGACCATAAAAACCCTGCCGTCTCGTTGTAAAGTTTCCTCCGCTGTCCTT10.5235602094240838No Hit
AGGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.5235602094240838No Hit
ACTCCATGACGACCGCCTGAGACCTTGTAGGAGTTCTGGTCGAACTTACC10.5235602094240838No Hit
ACTCCGTGTAAACCGCCTGAGACCTTGTAGGAATTCTGTTCGAACTTACC10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGGGAC10.5235602094240838No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAGGTGAACGCAAAAACTTT10.5235602094240838No Hit
AGCCAAGCCCTACACTACTGAAAGTTTGTGGAAATGAACACCGACATGTA10.5235602094240838No Hit
CGAAACGATATCAGTAGTCTCCTTATGTTCATAATGCAGCCACTCAATAT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGAATAAAAGCAGAGAC10.5235602094240838No Hit
ACGCCGTGAAAGCCGCCGGAGACCTTGTAGCCGCCTCCGTCGCCGAACTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGGACGCAAAAACTTT10.5235602094240838No Hit
AGCCTAGTCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGACTTT10.5235602094240838No Hit
ACGCCATGGAAGCCGCCGGAGACCTTGTAGCCCTTGCCCTCGAACTTTCC10.5235602094240838No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTAAAAGT10.5235602094240838No Hit
ACCCCGTAGAGGCCTCCGGAGAACTTGTACGCATTCACGACGGAGGTGAT10.5235602094240838No Hit
ACGCCGTGAAAACCGCCGGAGGTTTGATAAGCCTCTTTGTTGTCGAACTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAGACTTT10.5235602094240838No Hit
ACTCCGTGCAATCCGCCGGACACCTTGTAGGAGTTGTCATCGAACTTACC10.5235602094240838No Hit
AGACTAGAAATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGATATCTAGAATAAAAGCAGAGAC10.5235602094240838No Hit
ACTCCGTGCAGGCCTCCGGAGGAGCCGTACGAACCGCCGCCGAACTTGCC10.5235602094240838No Hit
ACGCCGTGTAGGCCTCCCGACACCTTGTAGGCATTGTCGTCTGAGGTGTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTTTTGTCTAGTTACAAGCAAGGTCT10.5235602094240838No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGTAAGTGATCGCAAAAACTTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAAGACTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGAATAAAAGCAGAGAC10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGAATAAAAGCAGCGAC10.5235602094240838No Hit
ACTCCGTGTAAGCCTCCGGAGACCTTGTACGCGTTCTCGTCGTTGGTGTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTAAAAGTTTGTGGAAGTGAACGCAAAAACTTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTAGTGGAAGTGAACGCAAAAACTTT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAGGCAGAGAC10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCAGTGAACGCAAAAGCCTT10.5235602094240838No Hit
AGCCTAGACATCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGACT10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGAATAAAAGCAGAGAC10.5235602094240838No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAGTAAAAGCAGAGAC10.5235602094240838No Hit
ATCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGTAGAGAC10.5235602094240838No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)