FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOATH614.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOATH614.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6584
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT524479.64763061968408No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT540.8201701093560146No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT510.7746051032806804No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGTACT460.6986634264884568No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT350.531591737545565No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC350.531591737545565No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT310.47083839611178613No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAGAGCAAGGACT270.4100850546780073No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT270.4100850546780073No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAGAAGCAAGGACT260.39489671931956255No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT260.39489671931956255No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT250.37970838396111783No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT240.3645200486026731No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAAGGACT230.3493317132442284No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGGCT220.33414337788578374No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT220.33414337788578374No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT210.318955042527339No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTTAAAAGCAAGGACT210.318955042527339No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT210.318955042527339No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT210.318955042527339No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT180.2733900364520049No Hit
AGCCTAGACATCCACTGCTGCCGACGACGTGGTAATGATCCTTCCGCTGT170.25820170109356017No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTTAAAAGCAAGGACT170.25820170109356017No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCTAAAAGCAAGGACT160.24301336573511542No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTTAAAAGCAAGGACT150.2278250303766707No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAGGACT150.2278250303766707No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTTAAAAGCAAGGACT140.212636695018226No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC140.212636695018226No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT120.18226002430133656No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT120.18226002430133656No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAATGACT110.16707168894289187No Hit
AGCCTAGACATCCACTGCTGGGTCTCGTGGTAATGATCCTTCCGCTGTCT110.16707168894289187No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT110.16707168894289187No Hit
GAGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGAC100.15188335358444716No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTTAAAAGCAAGGACT100.15188335358444716No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAACGACT100.15188335358444716No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTTAAAAGCAAGGACT100.15188335358444716No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT100.15188335358444716No Hit
AGCCTAGACATCCACTGCCGAAAGTTGTTATCTAGTTAAAAGCAAGGACT90.13669501822600244No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGAAAGGACT90.13669501822600244No Hit
AGCCTAGACATCCATTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT80.12150668286755771No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGTTAAAAGCAAGGACT70.106318347509113No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGTAAGGACT70.106318347509113No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTCAAAAGCAAGGACT70.106318347509113No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTGAAAGCAAGGACT70.106318347509113No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT70.106318347509113No Hit
AGCCCAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT70.106318347509113No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)