FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOATH610.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOATH610.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3299
Sequences flagged as poor quality0
Sequence length301
%GC46

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT146544.40739618066081No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT48914.822673537435588No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTTGATTAAAACTAAAACTTT34610.488026674749925No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT33310.093967869051228No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC320.9699909063352531No Hit
AGCCTAGACATCCACTGCTGGTGGTAATGATCCTTCCGCTGTCTCTTATA210.6365565322825099No Hit
AGCCTAGACATCCACTGCTGACGACGACGTGGTAATGATCCTTCCGCTGT200.6062443164595333No Hit
AGCCTAGACATCCACTGCTGCCGACGAGTGGTAATGATCCTTCCGCTGTC140.4243710215216732No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCATAAACTTT140.4243710215216732No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTC110.33343437405274323No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT90.2728099424067899No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTGGTAAAAGCAAGGACTT80.24249772658381327No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAAGGACTT80.24249772658381327No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAAAGCAAGGACTT80.24249772658381327No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT80.24249772658381327No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAAAGCAAGGACTT70.2121855107608366No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAGGCAAGGACTT70.2121855107608366No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGGCTT70.2121855107608366No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAAAGCAAGGACTT60.18187329493785995No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACCT60.18187329493785995No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAGATAAAAGCAAGGACTTT60.18187329493785995No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACTTT60.18187329493785995No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAAGGACTT60.18187329493785995No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAGCGCAAAAACTTT60.18187329493785995No Hit
AGCCTAGACATCCACTGCTGAAAGCTTGTGGAAGTGAACGCAAAAACTTT60.18187329493785995No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATCTAGTAAAAGCAAGGACTT60.18187329493785995No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAAAGCAAGGACTT50.1515610791148833No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGATTT50.1515610791148833No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAAAGCAAGGACTT50.1515610791148833No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT50.1515610791148833No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAAGGACTT50.1515610791148833No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAGCTTT50.1515610791148833No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTTGATTAAAACTAGAACTTT50.1515610791148833No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTGTTGATTAAAACTAAAACTTT40.12124886329190664No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.12124886329190664No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTAAAAGCAAGGACTT40.12124886329190664No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGAAGCAAGGACTT40.12124886329190664No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTGTAAATAAAAGCAAGGACTTT40.12124886329190664No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAACCTT40.12124886329190664No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCGTTGATTAAAACTAAAACTTT40.12124886329190664No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.12124886329190664No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.12124886329190664No Hit
GGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT40.12124886329190664No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTAAAAGCAAGGACTT40.12124886329190664No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)