FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOATH608.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOATH608.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3289
Sequences flagged as poor quality0
Sequence length301
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT270682.2742474916388No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT290.8817269686834904No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT170.5168744299179082No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT160.486470051687443No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT150.4560656734569778No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACCT140.4256612952265126No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTAAGAGCAAGGACTT120.36485253876558227No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT120.36485253876558227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT120.36485253876558227No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATATAGTAAGAGCAAGGACTT110.33444816053511706No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTAAGAGCAAGGACTT100.30404378230465184No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAATAGCAAGGACTT90.2736394040741867No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTC90.2736394040741867No Hit
AGCCTAGATATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT80.2432350258437215No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT80.2432350258437215No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTGAGAGCAAGGACTT80.2432350258437215No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGGCTT80.2432350258437215No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCCAGTAAGAGCAAGGACTT80.2432350258437215No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGATTT70.2128306476132563No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT70.2128306476132563No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAGAGCAAGGACTT70.2128306476132563No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAAGGACTT70.2128306476132563No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT70.2128306476132563No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCGAGGACTT70.2128306476132563No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT60.18242626938279113No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAGAGCAAGGACTT60.18242626938279113No Hit
AGCATAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT60.18242626938279113No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAGAGCAAGGACTT60.18242626938279113No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGCCTT60.18242626938279113No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTAAGAGCAAGGACTT60.18242626938279113No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT60.18242626938279113No Hit
AGCCTAGACATCCACGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT50.15202189115232592No Hit
AGCCTAAACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT50.15202189115232592No Hit
AGCCTAGACATCCATGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT40.12161751292186075No Hit
AGCCTAGACATCTACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.12161751292186075No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.12161751292186075No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAAGACTT40.12161751292186075No Hit
AGCCTAGACATCCACTGCTGAACGTTGTTATCTAGTAAGAGCAAGGACTT40.12161751292186075No Hit
AGCCTAGACATTCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.12161751292186075No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGTACTT40.12161751292186075No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAATGACTT40.12161751292186075No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)