FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOATH597.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOATH597.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8783
Sequences flagged as poor quality0
Sequence length301
%GC43

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT299834.13412273710577No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT189821.609928270522598No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT169119.25310258453831No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT4114.679494477968803No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC490.557895935329614No Hit
AGCCTAGACATCCACTGCTGTCTCGTGGTAATGATCCTTCCGCTGTCTCT430.48958214733006944No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT340.3871114653307526No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACC320.3643402026642377No Hit
AGCCTAGACATCCACTGCTGCCGACGATGTGGTAATGATCCTTCCGCTGT280.318797677331208No Hit
AGCCTAGACATCCACTGCTGCTCGGAGATGTGGTAATGATCCTTCCGCTG280.318797677331208No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT260.2960264146646932No Hit
AGCCTAGACATCCACTGCTGAGGTGGTAATGATCCTTCCGCTGTCTCTTA250.2846407833314357No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGGACT240.2732551519981783No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAAGGACT230.26186952066492086No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGGGACT220.25048388933166343No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTTAAAAGCAAGGACT180.20494136399863372No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGTACT180.20494136399863372No Hit
AGCCTAGACATCCACTGCTGAAGGTTGCTATCTAGTAAAAGCAGGGACTT150.17078446999886143No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTTAAAAGCAAGGACT150.17078446999886143No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGGACT140.159398838665604No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAGGGACTT140.159398838665604No Hit
AGCCTAGACATCCACTGCTAAAAGTTGTTATCTAGTTAAAAGCAAGGACT140.159398838665604No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTAAAAGCAGGGACTT130.1480132073323466No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGGCTT130.1480132073323466No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATCTAGTTAAAAGCAAGGACT120.13662757599908915No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT120.13662757599908915No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAGTAAAAGCAGGGACTT120.13662757599908915No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTACCTAGTTAAAAGCAAGGACT120.13662757599908915No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCATGGACTT120.13662757599908915No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT110.12524194466583172No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAGGCAGGGACTT110.12524194466583172No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATCTAGTAAAAGCAGGGACTT110.12524194466583172No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT110.12524194466583172No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACCT110.12524194466583172No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC110.12524194466583172No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT110.12524194466583172No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT110.12524194466583172No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAATGACT110.12524194466583172No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTTAAAAGCAAGGACT110.12524194466583172No Hit
AGCCTAGACATCCACTGCTGAAAGTCGCTATCTAGTAAAAGCAGGGACTT100.1138563133325743No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT100.1138563133325743No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCCAGTAAAAGCAGGGACTT100.1138563133325743No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGACTT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGAAGCAGGGACTT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGCTAAAAGCAAGGACT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTCTAGTTAAAAGCAAGGACT90.10247068199931686No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAGGGACTT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGCTGTTATCTAGTAAAAGCAGGGACTT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGAGACTT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTGAAAGCAAGGACT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCGAGGACT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAGAGCAGGGACTT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGGGCTT90.10247068199931686No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTAAAAGCAGGTACTT90.10247068199931686No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)