FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOATH596.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOATH596.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2766
Sequences flagged as poor quality0
Sequence length301
%GC45

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT71625.88575560375994No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT64923.46348517715112No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT48117.389732465654376No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT1957.049891540130152No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAATT1916.905278380332611No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGAACT291.0484454085321764No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAGAGACT220.7953723788864787No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAATTAAAAGCAAGAATT200.7230657989877078No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC110.39768618944323936No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT90.32537960954446854No Hit
AGCCTAGACATCCACTGCTGGTCTCGTGGTAATGATCCTTCCGCTGTCTC90.32537960954446854No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGATACT80.28922631959508316No Hit
CGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT80.28922631959508316No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTGTAAATAAAAGCAAGGACTTT80.28922631959508316No Hit
AGCCTAGACATACACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT70.2530730296456978No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAAACTT50.18076644974692696No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATTGATTAAAACCAAAGACTT50.18076644974692696No Hit
CGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT50.18076644974692696No Hit
AGACTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.14461315979754158No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT40.14461315979754158No Hit
AGCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTTT40.14461315979754158No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGGTTAAAACCAAAGACTT40.14461315979754158No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAAGCAAGGACT40.14461315979754158No Hit
AGCCTAGACATCCACTGCTAAAAGTTGCTATCTAGTTAAAAGCAGAGACT40.14461315979754158No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATCTAGTAAGAGCAAGGACTT40.14461315979754158No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAGCCAAAGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAGAGTTGTTATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTAGACATCAACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGGAAGTTGTTATCTAGTAAGAGCAAGGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAGGTTGTTATCTAGTTAAAAGCAAGAATT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTGAAAGCAGAGACT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTTAAAGGCAAGAATT30.10845986984815618No Hit
AGACTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTTAAAGTTGTTATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTAGACATACACTGCTGAAAGTTGTTATCTAGTAAAAGCAAGGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGGCT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTCGTTATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATTTAGTTAAAAGCAGAGACT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTCATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTAGAAATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTATACATCCACTGCTGAAAGTTGTTATTGATTAAAACCAAAGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACC30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAAGGGCAAGGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAAACT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATTGATTAAAACCGAAGACTT30.10845986984815618No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGTAGGAGCAAGGACTT30.10845986984815618No Hit
AGCCCAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT30.10845986984815618No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)