FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_ITS-OOATH576.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_ITS-OOATH576.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences49
Sequences flagged as poor quality0
Sequence length301
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCCTAGACATCCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT3163.26530612244898No Hit
AGCCTAGACATCCACTGCTGAAAGTTGTTATCTAGAATAAAAGCAGAGAC12.0408163265306123No Hit
AGCCTAGAAATCCACTGCTGACGGTGTTAATGATCCTTCCGCTGTCTCTT12.0408163265306123No Hit
AGCCTAGACACCCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT12.0408163265306123No Hit
ACGCCATGCAGGCCGCCGGACACCTTGTAGGCGTTCTCGTCCGAGGTGTT12.0408163265306123No Hit
AAGGGTTCAGCTTTGTCAACAATGGAGGCAACAACTTTGCTGTGAACATC12.0408163265306123No Hit
ACGCCATGGAGGCCGCCGGAGACCTTGTAGCCCTGGCCCTCGCCGAACTT12.0408163265306123No Hit
AGCCTAGACATCCACTGCTGAAAGTTTGTGGATAGGATAGAAAAAGCTTT12.0408163265306123No Hit
ACGCCATGGAGGCCGCCTGAGGTCTCGTAGGCCTTGCCGGAGAATTTGCC12.0408163265306123No Hit
AGCCTAGACATACACTGCTGAAAGTTTGTGGAAGTGAACGCAAAAAATTT12.0408163265306123No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGACCCTTCCGCTGTCTCTT12.0408163265306123No Hit
AGCCTAGATATCCACTGCTGACGGTGGTAATGATCCTTCCGCTGTCTCTT12.0408163265306123No Hit
AGCCTAGACATCCACTGCTGACGGTGGTAATGATCCTGCCGCTGTCTCTT12.0408163265306123No Hit
ACCCCGTTCACTCCTCCGGAATATTTTTATGCCCCCTGCCCGAACTTGCC12.0408163265306123No Hit
ACGCCGTGCAGGCCGCCTGAGACCTTGTACGCGTTCTCGTCGTTGGTGTT12.0408163265306123No Hit
AGCCTAGACATCCACTGCTGACGGTGGGAATGATCCTTCCGCTGTCTTCT12.0408163265306123No Hit
AGCCTAGACATCCCCTTCTTAACGTTTTTATATAAGAAGACAAAGTACTT12.0408163265306123No Hit
ACCCCGTGCAGGCCGCCGGACACCTTGTAGGCGTTGTCGTCACTGGTATT12.0408163265306123No Hit
AGCCTAGACATCCACTGCTGAAAGTTGCTATCTAGTTAAAAGCAGAGACT12.0408163265306123No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)