FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve864.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve864.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61
Sequences flagged as poor quality0
Sequence length301
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTTGCGGTTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC34.918032786885246No Hit
TCACTTGCGGTTCGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC23.278688524590164No Hit
TCACTTGCGGTTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC23.278688524590164No Hit
TCACTTGCGGCTCAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC23.278688524590164No Hit
ACGCCATGGAGGCCGCCTGAGACCGCGTAGGAGTCGCTGTCGAACTTGCC11.639344262295082No Hit
ACTCCGTGAAAGCCACCCGAGACCTTGTACGAGTCCTTGTCAAACTTACC11.639344262295082No Hit
TCACTTGCGGTTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCCC11.639344262295082No Hit
ACCCCGTGGAGGCCGCCGGAGACTTTGTAGCTGTTCTGGTTGAACTTGCC11.639344262295082No Hit
ACACCATGTAAGCCACCCGACGCGGCGTACGAGCCGCCGCCAAACTTTCC11.639344262295082No Hit
ACGCCATGTAAGCCGCCAGAGGTTTCATAGGCCTTTCCGTCGAACTTACC11.639344262295082No Hit
ACGCCGTGGAGGCCGCCGGAAACCTTGTACGCATTGTCGTCGGACGTGTT11.639344262295082No Hit
TCACTTTCGGTTGAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.639344262295082No Hit
TCCTTGCGGCTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCACG11.639344262295082No Hit
CGGCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGT11.639344262295082No Hit
ACTCCATGTAGACCTCCAGAGACCTTGTAGGAATTCTGGTCGAACTTACC11.639344262295082No Hit
TCACTTGCGGCTTGACTGAGCAAATTCGCGCGCCGCCACTACATTCCCAC11.639344262295082No Hit
CCGCCGTGTAGACCACCGGAAACTTTATATGAGTTCTGGTCGAACTTGCC11.639344262295082No Hit
ACACTTGCGGTTGAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.639344262295082No Hit
ACTCCATGGAGGCCGCCTGACACCTTGTAGGCATTGTCGTCCGACGTGTT11.639344262295082No Hit
ACGCCATGGAGTCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC11.639344262295082No Hit
TCACTTGCGGCTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.639344262295082No Hit
ACTCCGTGAAAGCCGCCGGAGACCTTGTAGGAATTCTGGTCGAACTTACC11.639344262295082No Hit
ACCCCGTGGAATCCGCCAGAAACCTTGTAAGCGCTCGTGGCGTTGTGCTC11.639344262295082No Hit
ACCCCATGAAAGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC11.639344262295082No Hit
ACGCCGTGCAAACCGCCTGAGACCTTGTAGGAATTCTGGTCTAACTTACC11.639344262295082No Hit
TCACTTGCGGTTCAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.639344262295082No Hit
TCACTTGCGGCTGAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.639344262295082No Hit
ACCCCGTGGAAGCCGCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC11.639344262295082No Hit
ACCCCGTGAAGGCCGCCGGAGACCTTGTAGCCGCCGCCGCCGAACTTGCC11.639344262295082No Hit
ACACCGTGGAAGCCTCCCGATGCGGCGTACGAACCGCCGCCGAACTTTCC11.639344262295082No Hit
ACGCCATGGAGGCCGCCCGATACCTTGTACGCGTTCTCGTCGTTGGTGTT11.639344262295082No Hit
ACTCCGTGAAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC11.639344262295082No Hit
ACTCCATGCAGGCCGCCCGAGACCTTGTAGGAGTTCTGGTCGAACTTACC11.639344262295082No Hit
TCACTTGCGGCTGAACTGGGAGACGTTGTTTACCCGCTCGGCTGATGGTG11.639344262295082No Hit
ACACTTGCGGTTCAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.639344262295082No Hit
ACCCCGTGGAGGCCGCCCGACACCGCGTACCCGCCGCCGCCGAACTTGCC11.639344262295082No Hit
ACTCCGTGAAAACCGCCGGACACCGCATAGCCGCCGCCGCCGAACTTGCC11.639344262295082No Hit
ACCCCATGAAGTCCGCCGGACACCGCGTAGGAGTCCGAGTCGAACTTGCC11.639344262295082No Hit
ACCCCATGCAAGCCGCCCGAGGTCTCGTAGACTTTGGAATCGAATTTGCC11.639344262295082No Hit
ACCCCGTGGAGGCCTCCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC11.639344262295082No Hit
ACGCCATGAAAGCCGCCTGAGACCTTGTAGGAATTCTGGTCGAACTTGCC11.639344262295082No Hit
CCACTTGCGGTTCGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.639344262295082No Hit
CCACTTGCGGCTCAACCGGGAGACGTTGTTTACCCGCTCGGCTGATGGTG11.639344262295082No Hit
TCACTTGCGGCTCGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC11.639344262295082No Hit
ACCCCGTGGAGGCCACCAGAGGTCTTGTAGTTTCCCGCGCCGCCGTTATC11.639344262295082No Hit
ACGCCATGAAGTCCGCCGGACACCTTGTACGTGTTCTTGTCGAACTTGCC11.639344262295082No Hit
CGGCGGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT11.639344262295082No Hit
ACGCCATGGAGGCCGCCCGAGACCGCGTAGCTCTTGCCGCGCTCGAACTT11.639344262295082No Hit
ACGCCATGAAGGCCTCCTGACACCTTGTAGGCGTTGTCGTCGGACGTGTT11.639344262295082No Hit
ACGCCGTGGAGACCACCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC11.639344262295082No Hit
ACGCCATGAAAGCCTCCTGAGACCTTGTAGTTGTTCTGGTTGAACTTGCC11.639344262295082No Hit
ACACCGTGGAAACCTCCAGAGACCTTGTAGCCGCCGCCGTCGCCGAACTT11.639344262295082No Hit
ACACCATGCAGTCCTCCTGACACGGAGTAGCCGCCGCCACCGAACTTGCC11.639344262295082No Hit
ACGCCATGGAAACCTCCGGAGACCTTGTAGGAATTCTGGTCGAACTTACC11.639344262295082No Hit
TCACTTGCGGCTCAACCGAGCAAATTCGCGCGCCTCCACGACATTCCCAC11.639344262295082No Hit
ACGCCGTGAAAGCCGCCGGAGGTCGCTTAGACATTGCTGTCGAACTTGCC11.639344262295082No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)