FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve856.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve856.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1883
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGAAGGCCGCCGGAGACCTTGTAGGAATTCTGGTCGAACTTACC30.15932023366967604No Hit
ACGCCGTGAAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC30.15932023366967604No Hit
ACGCCGTGAAGACCGCCGGATGCCGCATACGACCCCGAGCCGAACTTGCC30.15932023366967604No Hit
ACACCATGGAAGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTCCC20.10621348911311736No Hit
ACGCCGTGGAGGCCTCCGGACACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10621348911311736No Hit
ACGCCGTGAAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACTCCGTGAAGGCCGCCCGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACTCCGTGTAGGCCACCGGACACCGCGTACCCGCCGCCGCCGAACTTGCC20.10621348911311736No Hit
TCACTTGCGGTTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC20.10621348911311736No Hit
ACACCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.10621348911311736No Hit
ACACCGTGGAGGCCTCCCGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACGCCGTGAAGGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10621348911311736No Hit
ACCCCATGGAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACGCCGTGTAGGCCGCCTGAGACCTTGTAGGAATTCTGGTCGAACTTACC20.10621348911311736No Hit
ACGCCATGGAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACGCCATGGAGGCCTCCGGAAACCTTGTAGGAATTCTGGTCGAATTTTCC20.10621348911311736No Hit
ACTCCATGTAGACCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10621348911311736No Hit
TCACTTGCGGCTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC20.10621348911311736No Hit
ACGCCGTGGAGGCCACCTGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACTCCGTGGAAGCCACCCGATGTTTCGTAAGCTTTGGAGTCGAATTTGCC20.10621348911311736No Hit
ACTCCGTGAAAGCCGCCGGATGCCGCATACGACCCCGAGCCGAACTTGCC20.10621348911311736No Hit
ACGCCGTGTAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACGCCATGGAGACCACCTGAGACCTGGTAGGCGCCCTCTTCGAACTTGCC20.10621348911311736No Hit
ACTCCATGTAGGCCGCCGGAATGCAGTGTCGTGAGAATCACCTCAAGCGC20.10621348911311736No Hit
ACCCCGTGGAGGCCACCCGACACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10621348911311736No Hit
ACGCCGTGGAGGCCACCCGACACTTTGTACGAGTCCTTGTCGAACTTACA20.10621348911311736No Hit
ACACCGTGCAGGCCGCCAGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10621348911311736No Hit
ACTCCGTGGAGGCCGCCGGAGACCTGGTAGGCGCCCTCTTCGAACTTGCC20.10621348911311736No Hit
ACCCCGTGAAGTCCGCCCGCGTGCAGGACGGTGAGGACGACCTCGAGGGC20.10621348911311736No Hit
ACGCCATGCAGACCTCCCGAGACGGCGTAGCCACCGCCACCGAACTTGCC20.10621348911311736No Hit
ACGCCATGCAAGCCGCCTGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACACCGTGCAGTCCGCCCGAGGTTTCATAGGCTTTGCCGGAAAACTTGCC20.10621348911311736No Hit
ACCCCGTGGAGGCCACCGGAGACCTGGTAGGCGCCCTCTTCGAACTTGCC20.10621348911311736No Hit
ACGCCATGAAAGCCGCCGGAATGCAGCGTGCACATGATGACTTCGAGCGC20.10621348911311736No Hit
ACTCCGTGTAAACCACCGGAGACCTTGTAGGTGTCGGAATCGAACTTCCC20.10621348911311736No Hit
ACGCCATGAAGGCCGCCGGATGCAGCATACGACCCCGAGCCGAACTTGCC20.10621348911311736No Hit
ACTCCGTGCAGGCCGCCCGACACCTGGTAGGCGCCATCTTCGAACTTGCC20.10621348911311736No Hit
ACTCCATGAAGGCCTCCTGACACCTGGTAGGCGCCCTCCTCGAACTTGCC20.10621348911311736No Hit
ACACCATGCAAGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit
ACGCCGTGGAGGCCGCCGGACACCTTGTAGCTGTTCTGGTTGAACTTGCC20.10621348911311736No Hit
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.10621348911311736No Hit
ACCCCATGGAGGCCGCCGGACGCCGCATAGGAGCCGGAGCCGAACTTGCC20.10621348911311736No Hit
ACGCCGTGGAGGCCGCCTGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.10621348911311736No Hit
ACTCCGTGAAGGCCGCCCGATGCCGCATACGACCCCGAGCCGAACTTGCC20.10621348911311736No Hit
ACGCCGTGGAGGCCACCGGACACCTGGTAGGCGCCCTCTTCGAACTTGCC20.10621348911311736No Hit
ACTCCGTGTAGTCCACCCGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.10621348911311736No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)