FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve277.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve277.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11135
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC260.23349797934440952No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.1975752132914234No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.17961383026493039No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.16165244723843736No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.15267175572519084No Hit
ACTCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.15267175572519084No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.15267175572519084No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.15267175572519084No Hit
ACCCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.1436910642119443No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.1436910642119443No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.1436910642119443No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.1436910642119443No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.13471037269869782No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.13471037269869782No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.13471037269869782No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.13471037269869782No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.13471037269869782No Hit
ACTCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.12572968118545128No Hit
ACACCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.12572968118545128No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.12572968118545128No Hit
ACGCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.11674898967220476No Hit
ACCCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.11674898967220476No Hit
ACACCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.10776829815895823No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.10776829815895823No Hit
ACGCCATGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.10776829815895823No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)