FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve271.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve271.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16
Sequences flagged as poor quality0
Sequence length301
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACACCATGCAGGCCGCCCGACGCCGCGTAGGAGCCGGAGCCGAACTTGCC16.25No Hit
ACGCCGTGCAGGCCGCCCGACACCGCGTAGGACTCGCCGTCGAACTTGCC16.25No Hit
ACCCCGTGGAATCCGCCGGAGACCGCGTAGGACTCGCCGTCGAACTTGCC16.25No Hit
ACCCCGTGTAAGCCGCCGGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC16.25No Hit
ACGCCATGTAATCCTCCCGACACCGCGTACCCGCCGCCGCCGAACTTTCC16.25No Hit
ACGCCATTTAGGCCGCCTCCTGCCGCCTACGCACCGCCCCCGATCTTGCC16.25No Hit
ACACCATGTAGTCCTCCAGACACGGCGTAGGCGCCGCCGCCGAACTTGCC16.25No Hit
ACTCCGTGGAGACCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC16.25No Hit
ACTCCATGGAGGCCACCTGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC16.25No Hit
CGGCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCTGTTGTTAAAAGT16.25No Hit
AGTCCCCAACGCAATCTTCGAGCCCACGAGACGCGTAATCAGGAACATCG16.25No Hit
ACTCCGTGGAGGCCTCCTGACACCTCGTAGCTGTTCTGGTTGAACTTGCC16.25No Hit
ACGCCGTGGAGGCCGCCTGACACCGAGTAGCCGCCGCCGCCGAACTTGCC16.25No Hit
ACACCATGAAGTCCACCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC16.25No Hit
ACCCCGTGCAAACCGCCTGAGACCTAGTAGGCCTTATCGTCGAACTTTCC16.25No Hit
ACTCCATGGTCCCCTCCCGACACCTTTTAGCCACCGCCCCCCAACTTCCC16.25No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)