FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve269.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve269.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3458
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.2891844997108155No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.23134759976865238No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.23134759976865238No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.23134759976865238No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.23134759976865238No Hit
ACTCCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1735106998264893No Hit
ACTCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC60.1735106998264893No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACTCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACACCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACTCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACTCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACTCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACGCCATGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACGCCGTGTAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC50.14459224985540775No Hit
ACACCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCATGTAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACACCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACGCCATGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACGCCGTGGAAACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACACCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACGCCATGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACACCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACACCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCGTGTAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCGTGAAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACGCCGTGTAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACCCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACTCCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACCCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACGCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit
ACGCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC40.11567379988432619No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)