FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve261.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve261.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5143
Sequences flagged as poor quality0
Sequence length301
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC180.349990278047832No Hit
ACACCGTGGAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC160.3111024693758507No Hit
ACGCCGTGCAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC130.25277075636787866No Hit
ACGCCGTGTAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC130.25277075636787866No Hit
ACACCGTGGAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC120.233326852031888No Hit
ACGCCATGGAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC120.233326852031888No Hit
ACGCCGTGTAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC110.21388294769589733No Hit
ACTCCGTGGAAGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC110.21388294769589733No Hit
ACGCCGTGGAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC110.21388294769589733No Hit
ACACCGTGGAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC100.19443904335990667No Hit
ACGCCGTGGAAGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC100.19443904335990667No Hit
ACACCGTGAAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC100.19443904335990667No Hit
ACGCCGTGGAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC100.19443904335990667No Hit
ACTCCGTGAAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC90.174995139023916No Hit
ACGCCGTGCAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC90.174995139023916No Hit
ACGCCGTGGAGTCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC90.174995139023916No Hit
ACGCCATGGAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC90.174995139023916No Hit
ACGCCGTGAAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC90.174995139023916No Hit
ACTCCATGGAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC90.174995139023916No Hit
ACGCCGTGTAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACTCCGTGAAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACTCCGTGTAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACACCGTGCAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACTCCATGGAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACTCCGTGGAGGCCACCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACTCCGTGGAGGCCTCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACCCCGTGCAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACGCCGTGAAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC80.15555123468792534No Hit
ACTCCGTGCAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACGCCATGGAGGCCGCCAGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACACCGTGCAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACGCCGTGAAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACGCCGTGGAAGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACGCCGTGTAAGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACACCGTGTAGGCCTCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACGCCGTGGAGGCCACCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACCCCGTGGAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACTCCGTGTAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACGCCATGCAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACGCCGTGGAGGCCACCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACTCCGTGGAAGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC70.13610733035193467No Hit
ACACCATGTAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCATGCAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCGTGTAGGCCACCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCGTGTAAGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACCCCATGGAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACCCCGTGTAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCATGGAGACCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACTCCATGTAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCATGGAAGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACTCCGTGGAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACTCCGTGTAAGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACTCCGTGGAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCGTGGAGGCCGCCAGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACACCGTGTAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCGTGAAGTCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACTCCGTGGAGGCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCGTGGAGTCCGCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACTCCGTGTAGGCCGCCCGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCGTGTAGGCCACCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACTCCGTGGAGGCCGCCAGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACACCGTGGAGGCCACCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACGCCGTGGAGGCCTCCTGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit
ACCCCGTGGAGGCCGCCGGAGACCTTGTACGAGTTCTGGTCGAACTTGCC60.116663426015944No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)