FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve260.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve260.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8127
Sequences flagged as poor quality0
Sequence length301
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC270.33222591362126247No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC250.3076165866863541No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC230.2830072597514458No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.2091792789467208No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.19687461547926666No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.17226528854435832No Hit
ACCCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.15996062507690414No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.14765596160944996No Hit
ACGCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.14765596160944996No Hit
ACCCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1353512981419958No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1353512981419958No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1353512981419958No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1353512981419958No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1353512981419958No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1353512981419958No Hit
ACGCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACTCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACGCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACGCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACGCCATGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACGCCGTGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.12304663467454166No Hit
ACCCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit
ACGCCGTGCAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit
ACTCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit
ACTCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit
ACGCCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit
ACACCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit
ACCCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit
ACGCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.11074197120708748No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)