FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve258.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve258.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15826
Sequences flagged as poor quality0
Sequence length301
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC510.32225451788196635No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC480.30329836977126245No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC460.2906609376974599No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC440.27802350562365724No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC350.22115506129154555No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC320.20219891318084166No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC300.18956148110703905No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC300.18956148110703905No Hit
ACCCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC290.18324276507013776No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC290.18324276507013776No Hit
ACGCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC280.17692404903323644No Hit
ACGCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC270.17060533299633515No Hit
ACGCCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC260.16428661695943383No Hit
ACTCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC260.16428661695943383No Hit
ACGCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC260.16428661695943383No Hit
ACGCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC250.15796790092253254No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC250.15796790092253254No Hit
ACTCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC250.15796790092253254No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC240.15164918488563123No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC240.15164918488563123No Hit
ACGCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC240.15164918488563123No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC240.15164918488563123No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC240.15164918488563123No Hit
ACCCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC230.14533046884872994No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC230.14533046884872994No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC230.14533046884872994No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.13901175281182862No Hit
ACGCCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.13269303677492733No Hit
ACGCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.13269303677492733No Hit
ACGCCGTGAAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.13269303677492733No Hit
ACCCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.13269303677492733No Hit
ACGCCGTGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.13269303677492733No Hit
ACGCCATGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.12637432073802604No Hit
ACACCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.12637432073802604No Hit
ACGCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.12637432073802604No Hit
ACGCCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.12005560470112472No Hit
ACACCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.12005560470112472No Hit
ACACCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.12005560470112472No Hit
ACACCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.12005560470112472No Hit
ACACCGTGGAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.12005560470112472No Hit
ACTCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.12005560470112472No Hit
ACGCCGTGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.12005560470112472No Hit
ACACCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACGCCGTGGAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACACCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACGCCGTGGAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACACCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACACCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACGCCATGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACCCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.11373688866422343No Hit
ACTCCATGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACGCCGTGTAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACGCCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACACCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACGCCATGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACTCCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACTCCGTGTAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACGCCATGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.10741817262732213No Hit
ACCCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACGCCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACTCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACGCCGTGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACGCCGTGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACGCCGTGTAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACGCCATGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACTCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACGCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit
ACGCCATGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.10109945659042083No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)