FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve245.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve245.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences12227
Sequences flagged as poor quality0
Sequence length301
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC330.26989449578801017No Hit
ACGCCGTGAAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC200.16357242168970312No Hit
ACGCCGTGGAGGCCGCCCGACACCTTGTACGAGTTGTCGTCGAACTTACC180.1472151795207328No Hit
ACACCGTGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC170.13903655843624765No Hit
ACCCCGTGGAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC140.11450069518279218No Hit
ACGCCGTGGAGGCCGCCTGACACCTTGTACGAGTTGTCGTCGAACTTACC140.11450069518279218No Hit
ACGCCGTGCAGGCCGCCGGACACCTTGTACGAGTTGTCGTCGAACTTACC130.10632207409830702No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)