FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve240.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve240.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17890
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC520.2906651760760201No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC460.257126886528787No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC440.24594745667970933No Hit
ACGCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC310.1732811626607043No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC300.16769144773616546No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC300.16769144773616546No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC300.16769144773616546No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC290.16210173281162663No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC290.16210173281162663No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC270.1509223029625489No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC260.14533258803801005No Hit
ACACCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC250.1397428731134712No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC240.13415315818893236No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.12297372833985466No Hit
ACTCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.12297372833985466No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.12297372833985466No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.12297372833985466No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.11738401341531582No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.11738401341531582No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.11179429849077697No Hit
ACGCCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.11179429849077697No Hit
ACGCCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.10620458356623813No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC190.10620458356623813No Hit
ACGCCGTGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.10061486864169927No Hit
ACGCCGTGTAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC180.10061486864169927No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)