FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve232.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve232.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences10306
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.16495245488065205No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.1455462837182224No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.13584319813700757No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.12614011255579274No Hit
ACGCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.12614011255579274No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.12614011255579274No Hit
ACGCCATGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.11643702697457792No Hit
ACGCCATGGAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.11643702697457792No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.11643702697457792No Hit
ACGCCGTGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.11643702697457792No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.11643702697457792No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.11643702697457792No Hit
ACCCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.10673394139336309No Hit
ACTCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.10673394139336309No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.10673394139336309No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.10673394139336309No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.10673394139336309No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.10673394139336309No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)