FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve220.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve220.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8577
Sequences flagged as poor quality0
Sequence length301
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGGAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC200.23318176518596248No Hit
ACGCCGTGGAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC160.18654541214876996No Hit
ACGCCGTGGAGGCCGCCCGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC150.17488632388947184No Hit
ACGCCGTGTAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC140.16322723563017372No Hit
ACGCCGTGCAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC140.16322723563017372No Hit
ACGCCATGGAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC130.1515681473708756No Hit
ACTCCGTGGAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC130.1515681473708756No Hit
ACGCCGTGGAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC120.13990905911157747No Hit
ACACCGTGGAGGCCGCCCGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC120.13990905911157747No Hit
ACACCGTGGAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC120.13990905911157747No Hit
ACTCCGTGGAGGCCGCCCGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC110.12824997085227935No Hit
ACGCCGTGAAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC100.11659088259298124No Hit
ACTCCGTGTAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC100.11659088259298124No Hit
ACCCCGTGCAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit
ACACCGTGTAGGCCGCCCGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit
ACACCGTGTAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit
ACTCCGTGTAGGCCGCCCGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit
ACCCCGTGGAGGCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit
ACGCCGTGGAGTCCGCCGGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit
ACGCCATGGAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit
ACTCCGTGTAGGCCGCCTGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit
ACTCCGTGCAGGCCGCCCGAGGAGGCGTAGGAGCCGGATCCGAACTTGCC90.1049317943336831No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)