FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBDve209.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBDve209.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19987
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC430.21513984089658278No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC360.18011707609946465No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC280.1400910591884725No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC270.13508780707459847No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC240.12007805073297644No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC240.12007805073297644No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.1100715465052284No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.1100715465052284No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.10506829439135437No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)