FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBChi98.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBChi98.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6559
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.2286933983839No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16770849214819333No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15246226558926665No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15246226558926665No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13721603903034No Hit
ACGCCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12196981247141334No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12196981247141334No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12196981247141334No Hit
ACGCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12196981247141334No Hit
ACTCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACTCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACACCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACGCCGTGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACTCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACGCCGTGCAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACGCCGTGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit
ACGCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10672358591248667No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)