FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBChi186.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBChi186.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7188
Sequences flagged as poor quality0
Sequence length301
%GC65

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC350.48692264885920983No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC270.3756260434056761No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC210.2921535893155259No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.27824151363383415No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.27824151363383415No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.27824151363383415No Hit
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.27824151363383415No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC170.23650528658875902No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.22259321090706735No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.20868113522537562No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.20868113522537562No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.20868113522537562No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.20868113522537562No Hit
ACGCCGTGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.19476905954368393No Hit
ACGCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.1808569838619922No Hit
ACCCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.1808569838619922No Hit
ACGCCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.1669449081803005No Hit
ACCCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.1669449081803005No Hit
ACGCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.1669449081803005No Hit
ACGCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.1669449081803005No Hit
ACACCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.1669449081803005No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.1669449081803005No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.1669449081803005No Hit
ACCCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1530328324986088No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1530328324986088No Hit
ACGCCATGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1530328324986088No Hit
ACTCCGTGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1530328324986088No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.1530328324986088No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACGCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACGCCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACTCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACTCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACACCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACGCCGTGTAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACACCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACTCCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACTCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACACCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACGCCGTGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACCCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.13912075681691707No Hit
ACGCCGTGGAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACTCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACACCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACGCCATGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACGCCGTGTAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACACCGTGTAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACGCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.12520868113522537No Hit
ACGCCGTGTAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACTCCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACCCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACTCCATGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACGCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACGCCATGTAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACCCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACACCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACACCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACTCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACACCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACGCCATGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACTCCATGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACGCCGTGAAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACACCGTGAAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACACCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACTCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACGCCATGGAGGCCGCCTGACACGGCGTAGGCGCCGCCGCCGAACTTGCC80.11129660545353368No Hit
ACGCCGTGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.11129660545353368No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)