FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBChi185.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBChi185.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6546
Sequences flagged as poor quality0
Sequence length301
%GC66

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC330.5041246562786434No Hit
ACGCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC270.4124656278643446No Hit
ACGCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC220.3360831041857623No Hit
ACTCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.30553009471432935No Hit
ACCCCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC200.30553009471432935No Hit
ACGCCGTGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC160.2444240757714635No Hit
ACGCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.229147571035747No Hit
ACACCGTGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC150.229147571035747No Hit
ACTCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.21387106630003055No Hit
ACCCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC140.21387106630003055No Hit
ACGCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.1985945615643141No Hit
ACTCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC130.1985945615643141No Hit
ACCCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.18331805682859761No Hit
ACTCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.18331805682859761No Hit
ACACCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC120.18331805682859761No Hit
ACGCCGTGGAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACGCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACTCCGTGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACGCCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACGCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACACCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACCCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACTCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACACCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACGCCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACGCCGTGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACGCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACGCCGTGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC110.16804155209288116No Hit
ACGCCGTGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACGCCGTGAAGGCCGCCCGACACGGCGTAGGCGCCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACTCCGTGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACTCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACGCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACACCGTGGAGGCCACCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACGCCATGGAGGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACGCCATGTAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACGCCATGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACTCCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACGCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACACCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACACCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACTCCGTGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACGCCGTGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACGCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC100.15276504735716467No Hit
ACTCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGGAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGTAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGAAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCATGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACCCCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGGAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGTAGACCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACACCATGGAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGGAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACACCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACTCCATGGAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGTAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGGAGACCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACGCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC90.13748854262144822No Hit
ACACCGTGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACTCCGTGCAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACCCCGTGCAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACACCATGAAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACACCGTGTAAGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACGCCGTGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACACCATGAAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACCCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACGCCGTGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACGCCGTGGAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACGCCGTGCAGTCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACTCCGTGTAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACGCCGTGGAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACGCCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACGCCATGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACCCCATGGAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC80.12221203788573175No Hit
ACGCCATGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCGTGTAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACCCCGTGCAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGAAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCGTGGAAGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCGTGGAAGCCTCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCATGGAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCGTGGAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGCAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACACCGTGCAGGCCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCATGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACACCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCATGTAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGTAGGCCACCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCGTGTAGGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGTAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGGAGTCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACACCATGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGAAGGCCTCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCATGGAGGCCGCCAGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGGAGGCCGCCCGACACGGCGTAGGCGCCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGTAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACACCGTGGAGACCGCCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGAAGGCCTCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACACCATGTAGGCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGAAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCGTGGAAGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACTCCGTGTAGACCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACACCGTGGAGTCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit
ACGCCGTGGAGTCCGCCTGATGCCGCGTACGAACCGCCGCCGAACTTGCC70.10693553315001528No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)