FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBATH9.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBATH9.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8586
Sequences flagged as poor quality0
Sequence length301
%GC63

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACGCCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC160.1863498718844631No Hit
ACACCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC110.12811553692056835No Hit
ACGCCGTGGAGGCCGCCGGAGACGCCGTAGGACTTGCCGTCGAACTTGCC90.10482180293501049No Hit
ACTCCGTGGAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC90.10482180293501049No Hit
ACGCCGTGTAGGCCGCCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC90.10482180293501049No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)