FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBATH873.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBATH873.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27
Sequences flagged as poor quality0
Sequence length301
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCACTTGCGGTTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC27.4074074074074066No Hit
TCACTTGCGGTTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC27.4074074074074066No Hit
GCACTTGCGGTTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
TCACTTGCGGCTGGACTGCGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
TCACTTGCGGCTCGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
TCACTTGCGGCTGAACCGAGCAAACTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
ACACCGTGAAGGCCGCCCGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC13.7037037037037033No Hit
ACACTTGCGGTTGGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
TCACTTGCGGTTGAACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
ACCCCGTGAAGGCCGCCTGAGACCTTGTACGCGTTCTCGTCGTTGGTGTT13.7037037037037033No Hit
TCACTTGCGGTTCAACCGAGCAAATTCGCGCGCCGCCACAACATTCCCAC13.7037037037037033No Hit
ACCCCGTGAAGGCCGCCAGACACCTTGTAGGCGTTCGAATCATTGGTGTT13.7037037037037033No Hit
GCACTTGCGGCTGGACCGAGCAAATTCGCGCGCCACCACGACATTCCCAC13.7037037037037033No Hit
ACTCCGTGCAAACCTCCGGACGCGGCGTAGGAGCCGCTGCCGAACTTGCC13.7037037037037033No Hit
ACCCCGTGCAGTCCTCCCGACACCTTGTACGCGTTGTCGTCGCTGGTGTT13.7037037037037033No Hit
ACTCCATGGAAGCCACCGGATGCCGCGTACGAACCGCCGCCGAACTTGCC13.7037037037037033No Hit
TCACTTGCGGTTGAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
ACGCCGTGAAGACCGCCTGAAACCTTGTAGGAATTCTGGTCGAATTTTCC13.7037037037037033No Hit
ACGCCATGGAGGCCACCTGATGTACATAGCAGGCCTCTGTCTCTTATACA13.7037037037037033No Hit
TCACTTGCGGTTCAACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
ACACCGTGCAACCCGCCCGAGACCTTGTAGGAGTTCTGGTCGAACTTACC13.7037037037037033No Hit
ACTCCATGTAAACCGCCAGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC13.7037037037037033No Hit
ACTCCGTGGAGGCCACCGGAGACCTTGTACGCGTTCTCGTCGTTGGTGTT13.7037037037037033No Hit
TCACTTGCGGCTGGACCGAGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit
ACACTTGCGGCTCGACTGAGCAAATTCGCGCGCCGCCACGACATTCCCAC13.7037037037037033No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)