FastQCFastQC Report
Mon 29 Jan 2024
000000000-LDHC6_l01_n02_GyrBATH62.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
Filename000000000-LDHC6_l01_n02_GyrBATH62.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1575
Sequences flagged as poor quality0
Sequence length301
%GC64

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTCCGTGAAGGCCGCCAGAGACCTTGTAGCTGTTCTGGTTGAACTTGCC30.19047619047619047No Hit
ACGCCGTGCAGGCCGCCGGAGACGCCGTAGCTCTTGCCGTCGAACTTCCC20.12698412698412698No Hit
ACTCCGTGAAGGCCACCGGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.12698412698412698No Hit
CGGCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGT20.12698412698412698No Hit
ACACCGTGAAGGCCGCCCGATGCCGCGTACGAACCGCCGCCGAACTTGCC20.12698412698412698No Hit
ACTCCGTGTAGTCCTCCTGAGACCTTGTATCCGCCGCCGCCGAATTTTCC20.12698412698412698No Hit
ACGCCGTGGAGGCCACCTGAGACCTTGTAGGAGTTCTGGTCGAACTTACC20.12698412698412698No Hit
ACTCCATGGAATCCGCCGGAGACCTTGTAGGAATTCTGGTCGAACTTGCC20.12698412698412698No Hit
ACGCCATGGAGTCCACCCGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.12698412698412698No Hit
ACGCCGTGTAGACCTCCTGACACCTTGTAACTGTCGTTGTCGAACTTGCC20.12698412698412698No Hit
ACACCATGGAATCCTCCAGCGCCGATTTGTCGGGAAATTTCGGATGCGGA20.12698412698412698No Hit
ACGCCATGTAGGCCGCCTGAGACGCCGTAGGACTTGCCGTCGAACTTGCC20.12698412698412698No Hit
ACGCCGTGTAGGCCGCCGGACACTTTGTAGGAGTTCTGGTCGAACTTACC20.12698412698412698No Hit
ACTCCGTGGAGGCCACCGGACACCTTGTAGCCCCCGTCGCCGAACTTTCC20.12698412698412698No Hit
ACTCCATGCAGGCCACCGGACACCTTGTAGGAATTCCGGTCGAATTTTCC20.12698412698412698No Hit
ACGCCGTGCAGTCCGCCAGAGGAACCGTAGGACGACCCGCCGAACTTCCC20.12698412698412698No Hit
ACTCCGTGGAAGTCTCCGGAGGTTTCATAGACCTTGCTGTCGGACTTTCC20.12698412698412698No Hit
ACCCCATGAAGGCCGCCCGACACCTTGTAGCCACCGTCGCCGAACTTCCC20.12698412698412698No Hit
ACACCGTGTAGGCCGCCGGAGACGCCGTAGCTCTTGCCGTCGAACTTCCC20.12698412698412698No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)